RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TCN1P20061 433 aaPredicted RBP14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 CCNFP41002 786 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 ACTR3P61158 418 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 AP2B1P63010 937 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 DPYSL2Q16555 572 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 SLC9B1Q4ZJI4 515 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 PPM1LQ5SGD2 360 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 PRAMEF19Q5SWL8 479 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 PDPK2PQ6A1A2 396 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 RNF111Q6ZNA4 994 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 MAPK15Q8TD08 544 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 SGF29Q96ES7 293 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 SNX25Q9H3E2 840 aa14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 PAPOLBQ9NRJ5 636 aaKnown RBP14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.4□□□□□ -0.1
CACNA1A-228ENST00000636610 PHGDHO43175 533 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 OPHN1O60890 802 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 HSPA4LO95757 839 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 PEX2P28328 305 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 COPAP53621 1224 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 SARNPP82979 210 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 ZNF460Q14592 562 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 GRIK4Q16099 956 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 GRAMD1BQ3KR37 738 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 PKDCCQ504Y2 493 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 RABGAP1LQ5R372 815 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 NXNQ6DKJ4 435 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 OR52E8Q6IFG1 317 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 RNF169Q8NCN4 708 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 SLC7A14Q8TBB6 771 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 RNF139Q8WU17 664 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 EDEM1Q92611 657 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 DCPSQ96C86 337 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 RTP4Q96DX8 246 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 QKIQ96PU8 341 aaKnown RBP eCLIP14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 SORT1Q99523 831 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 SNX15Q9NRS6 342 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 ANGPTL2Q9UKU9 493 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 ANK1P16157 1881 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 AP1G2O75843 785 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 ARSAP15289 507 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 EPHA3P29320 983 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 HOXA11P31270 313 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 CPOXP36551 454 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 MAGEA3P43357 314 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 DSG1Q02413 1049 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 CDC16Q13042 620 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 TRIP10Q15642 601 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 IRGCQ6NXR0 463 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 SNX31Q8N9S9 440 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 MCUQ8NE86 351 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 KCNN1Q92952 543 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 USP13Q92995 863 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 OR52B2Q96RD2 323 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 MED10Q9BTT4 135 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 CHRAC1Q9NRG0 131 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 PIN4Q9Y237 131 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 PPME1Q9Y570 386 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 ZBTB14O43829 449 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 RNASEH1O60930 286 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 MAP3K7CLP57077 242 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 SOX4Q06945 474 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 SEMA5AQ13591 1074 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 SFT2D3Q587I9 215 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 RASIP1Q5U651 963 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 TMEM198Q66K66 360 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 OPTNQ96CV9 577 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 GBP5Q96PP8 586 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 COG4Q9H9E3 785 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 ANLNQ9NQW6 1124 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 ZNF212Q9UDV6 495 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 ADAMTS6Q9UKP5 1117 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 SLC39A10Q9ULF5 831 aa14.39□□□□□ -0.11
CACNA1A-228ENST00000636610 PRKCGP05129 697 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 CPA3P15088 417 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 RAP1GDS1P52306 607 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 TUBB3Q13509 450 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 ZRSR2Q15696 482 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 EXOC8Q8IYI6 725 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 ECSITQ9BQ95 431 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 RHOBTB2Q9BYZ6 727 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 PIGVQ9NUD9 493 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 COPG2Q9UBF2 871 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 INPP5FQ9Y2H2 1132 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 TK2O00142 265 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 MAGEC1O60732 1142 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 LYNP07948 512 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 AQP4P55087 323 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 PKNOX1P55347 436 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 BST2Q10589 180 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 WASHC5Q12768 1159 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 R3HDM1Q15032 1099 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 TRMT5Q32P41 509 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 EFHC1Q5JVL4 640 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 MARCH8Q5T0T0 291 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 FSTL4Q6MZW2 842 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 SLC30A9Q6PML9 568 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 NET1Q7Z628 596 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 KBTBD7Q8WVZ9 684 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 ZFP42Q96MM3 310 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms