RNA–Protein interactions for RNA: ENST00000636448.1

CACNA1D-209, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 3,978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-209ENST00000636448 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 HLA-DPA1P20036 260 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 GRK2P25098 689 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 EFEMP1Q12805 493 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 ZNF268Q14587 947 aaPredicted RBP8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 PDK2Q15119 407 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 SLC5A9Q2M3M2 681 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 GNASQ5JWF2 1037 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 C6orf52Q5T4I8 152 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 BBS12Q6ZW61 710 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 NAT16Q8N8M0 369 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 MAGEE2Q8TD90 523 aaPredicted RBP8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 DNAJB3Q8WWF6 145 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 LENG9Q96B70 501 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 ZNF512Q96ME7 567 aaPredicted RBP8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 NCKIPSDQ9NZQ3 722 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 C3P01024 1663 aa8.31□□□□□ -1.08
CACNA1D-209ENST00000636448 MYOCOSA0A1B0GUC4 107 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 SIGLEC16A6NMB1 481 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 SLC26A4O43511 780 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 PEX11AO75192 247 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 LSM8O95777 96 aaKnown RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ALADP13716 330 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 YBX3P16989 372 aaKnown RBP eCLIP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 SNRPFP62306 86 aaKnown RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 FOLH1Q04609 750 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 BFSP2Q13515 415 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 MSS51Q4VC12 460 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 FBXO47Q5MNV8 452 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 C10orf120Q5SQS8 335 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 PPP1R26Q5T8A7 1209 aaPredicted RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 TMEM198Q66K66 360 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ILDR2Q71H61 639 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 DHDDSQ86SQ9 333 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 SLC9A9Q8IVB4 645 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 TMCO5AQ8N6Q1 288 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 OR52K2Q8NGK3 314 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 CIB1Q99828 191 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ZNF518BQ9C0D4 1074 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 CDHR5Q9HBB8 845 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 SYBUQ9NX95 663 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ZNF212Q9UDV6 495 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 CORO1CQ9ULV4 474 aaPredicted RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 BTRCQ9Y297 605 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 CEP290O15078 2479 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 COL1A1P02452 1464 aaPredicted RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 TYW5A2RUC4 315 aaKnown RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ASMTLO95671 621 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 TRUB2O95900 331 aaKnown RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 HSMCR30P0CW71 290 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 EIF4BP23588 611 aaKnown RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 PSMA4P25789 261 aaKnown RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 POU1F1P28069 291 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ADARP55265 1226 aaKnown RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 YWHAZP63104 245 aaKnown RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 POU4F1Q01851 419 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 SEMA5AQ13591 1074 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ZNF460Q14592 562 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 CYP51A1Q16850 503 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 LDLRAP1Q5SW96 308 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 PPP1R15BQ5SWA1 713 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 SDHAF4Q5VUM1 108 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 MFSD5Q6N075 450 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 PLD3Q8IV08 490 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 TAGAPQ8N103 731 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ELMO1Q92556 727 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 MFSD3Q96ES6 412 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 PRR11Q96HE9 360 aaPredicted RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 VCPIP1Q96JH7 1222 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 EXOC2Q96KP1 924 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ULBP1Q9BZM6 244 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 CDT1Q9H211 546 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 PORCNQ9H237 461 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ALG9Q9H6U8 611 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 MID1IP1Q9NPA3 183 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 KCNK4Q9NYG8 393 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 TIMM44O43615 452 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ZNF682O95780 498 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ITGA2BP08514 1039 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 COX4I1P13073 169 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 FDFT1P37268 417 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 GRIA4P48058 902 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 SCNN1BP51168 640 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ABCE1P61221 599 aaKnown RBP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 PLCL1Q15111 1095 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 MTX3Q5HYI7 312 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 PRAMEF19Q5SWL8 479 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 TSHZ1Q6ZSZ6 1077 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 TMEM192Q8IY95 271 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 HS6ST3Q8IZP7 471 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 FIG4Q92562 907 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 ZNF516Q92618 1163 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 HERPUD2Q9BSE4 406 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 SLC4A5Q9BY07 1137 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 EBF3Q9H4W6 596 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 POMKQ9H5K3 350 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 NRDE2Q9H7Z3 1164 aa8.3□□□□□ -1.08
CACNA1D-209ENST00000636448 PALMDQ9NP74 551 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms