RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 PACS1Q6VY07 963 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 UNC13DQ70J99 1090 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SPATA2LQ8IUW3 424 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 VRK3Q8IV63 474 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 LIX1LQ8IVB5 337 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 MAPKAPK5Q8IW41 473 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC170Q8IYT3 715 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TMEM132CQ8N3T6 1108 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 FAM109AQ8N4B1 249 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 AFAP1Q8N556 730 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SLC15A4Q8N697 577 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 VGLL2Q8N8G2 317 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF527Q8NB42 609 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 PCSK9Q8NBP7 692 aaKnown RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SPC24Q8NBT2 197 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ZBTB44Q8NCP5 570 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 PSD4Q8NDX1 1056 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 MOSPD2Q8NHP6 518 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CPT1CQ8TCG5 803 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF384Q8TF68 577 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 HERVK_113Q902F9 699 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SHC3Q92529 594 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 HTRA1Q92743 480 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 RRP36Q96EU6 259 aaKnown RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 MYEOVQ96EZ4 313 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CDCA5Q96FF9 252 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 LTV1Q96GA3 475 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 COG3Q96JB2 828 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 VPS39Q96JC1 886 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 MAELQ96JY0 434 aaKnown RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC43Q96MW1 224 aaKnown RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TMEM237Q96Q45 408 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 TRIB1Q96RU8 372 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 YME1L1Q96TA2 773 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SMOQ99835 787 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 HEPHQ9BQS7 1158 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ZSWIM1Q9BR11 485 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ZPBPQ9BS86 351 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 DDX23Q9BUQ8 820 aaKnown RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 MLST8Q9BVC4 326 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 REXO4Q9GZR2 422 aaKnown RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SIL1Q9H173 461 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 MAGEH1Q9H213 219 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 RNPEPQ9H4A4 650 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF768Q9H5H4 540 aaKnown RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ACAD9Q9H845 621 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 PREBQ9HCU5 417 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 PDE7BQ9NP56 450 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC177Q9NQR7 707 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 HAUS2Q9NVX0 235 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 MOSPD1Q9UJG1 213 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 GRID1Q9ULK0 1009 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 BARX2Q9UMQ3 279 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SORCS3Q9UPU3 1222 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CDYLQ9Y232 598 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 ATP11BQ9Y2G3 1177 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 CAB39Q9Y376 341 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-208ENST00000635562 NEU2Q9Y3R4 380 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 SPATA31A3Q5VYP0 1347 aa3.16□□□□□ -1.9
PSPC1-208ENST00000635562 AATKQ6ZMQ8 1374 aa3.15□□□□□ -1.9
PSPC1-208ENST00000635562 TDRD9Q8NDG6 1382 aaKnown RBP3.15□□□□□ -1.9
PSPC1-208ENST00000635562 DCAF1Q9Y4B6 1507 aa3.15□□□□□ -1.9
PSPC1-208ENST00000635562 COL4A3Q01955 1670 aa3.15□□□□□ -1.9
PSPC1-208ENST00000635562 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 GOLGA6L3A6NEY3 463 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 HNRNPCL2B2RXH8 293 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 F8VZ95 297 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 POLRMTO00411 1230 aaKnown RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 POLR3GO15318 223 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 PLA2G6O60733 806 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 HNRNPCL1O60812 293 aaKnown RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 PTP4A3O75365 173 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 SEC22BO75396 215 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 TMEM63AO94886 807 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 TRIM16O95361 564 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 QDPRP09417 244 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 NR2F1P10589 423 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 TOP1P11387 765 aaKnown RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 HARSP12081 509 aaKnown RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 TNNT1P13805 278 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 PORP16435 677 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 GAP43P17677 238 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 HLA-DPA1P20036 260 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 MAPK3P27361 379 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 IL1R2P27930 398 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 GNL1P36915 607 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 USP8P40818 1118 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 IFNAR2P48551 515 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 HSPA7P48741 367 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 POLD2P49005 469 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 CENPAP49450 140 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 SULT1E1P49888 294 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 ANXA11P50995 505 aaKnown RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 GPC3P51654 580 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 ZNF134P52741 427 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 CCNA1P78396 465 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 HSD11B2P80365 405 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 RELQ04864 619 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 ZNF844Q08AG5 666 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 BFSP1Q12934 665 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms