RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-262	ENST00000628078	NCKAP1	Q9Y2A7	1128 aa		14.01	□□□□□ -0.17
TCF4-262	ENST00000628078	GPSM3	Q9Y4H4	160 aa		14.01	□□□□□ -0.17
TCF4-262	ENST00000628078	CEP83	Q9Y592	693 aa		14.01	□□□□□ -0.17
TCF4-262	ENST00000628078	TP53BP1	Q12888	1972 aa	Predicted RBP	14.01	□□□□□ -0.17
TCF4-262	ENST00000628078	ZFYVE26	Q68DK2	2539 aa		14.01	□□□□□ -0.17
TCF4-262	ENST00000628078	PKD1L2	Q7Z442	2459 aa		14.01	□□□□□ -0.17
TCF4-262	ENST00000628078	TRABD2B	A6NFA1	517 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	FLRT2	O43155	660 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	RNASEH2A	O75792	299 aa	Known RBP	14	□□□□□ -0.17
TCF4-262	ENST00000628078	SMC2	O95347	1197 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	LATS1	O95835	1130 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	IGHV4-34	P06331	123 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	PAEP	P09466	180 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	ZNF883	P0CG24	379 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	CD27	P26842	260 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	GALC	P54803	685 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	STX17	P56962	302 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	SUZ12	Q15022	739 aa	Known RBP	14	□□□□□ -0.17
TCF4-262	ENST00000628078	TTC31	Q49AM3	519 aa	Predicted RBP	14	□□□□□ -0.17
TCF4-262	ENST00000628078	DCAF6	Q58WW2	860 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	RAP1GAP2	Q684P5	730 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	NUGGC	Q68CJ6	796 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	KIAA0895L	Q68EN5	471 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	DENND1B	Q6P3S1	775 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	NCEH1	Q6PIU2	408 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	DHRS13	Q6UX07	377 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	TMPRSS7	Q7RTY8	843 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	LGI2	Q8N0V4	545 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	FIBIN	Q8TAL6	211 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	BAHD1	Q8TBE0	780 aa	Predicted RBP	14	□□□□□ -0.17
TCF4-262	ENST00000628078	DQX1	Q8TE96	717 aa	Known RBP	14	□□□□□ -0.17
TCF4-262	ENST00000628078	IRGQ	Q8WZA9	623 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	LMLN	Q96KR4	655 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	MRGPRX3	Q96LB0	322 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	CDC6	Q99741	560 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	ORAI3	Q9BRQ5	295 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	RSPH9	Q9H1X1	276 aa	Predicted RBP	14	□□□□□ -0.17
TCF4-262	ENST00000628078	PABPC3	Q9H361	631 aa	Known RBP	14	□□□□□ -0.17
TCF4-262	ENST00000628078	ACP6	Q9NPH0	428 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	ERVW-1	Q9UQF0	538 aa		14	□□□□□ -0.17
TCF4-262	ENST00000628078	DSP	P15924	2871 aa	Known RBP	14	□□□□□ -0.17
TCF4-262	ENST00000628078	CABIN1	Q9Y6J0	2220 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	PLK4	O00444	970 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	BIN1	O00499	593 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	WNT1	P04628	370 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	KRT5	P13647	590 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	VAV1	P15498	845 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	SLC8A1	P32418	973 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	PSMD8	P48556	350 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	STK19	P49842	368 aa	Predicted RBP	13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	C21orf59	P57076	290 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	ZNF445	P59923	1031 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	PITX1	P78337	314 aa	Predicted RBP	13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	LRRC63	Q05C16	580 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	CDH18	Q13634	790 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	CST6	Q15828	149 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	MS4A13	Q5J8X5	152 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	PITRM1	Q5JRX3	1037 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	C9orf64	Q5T6V5	341 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	CIR1	Q86X95	450 aa	Predicted RBP	13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	SCML4	Q8N228	414 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	HJURP	Q8NCD3	748 aa	Predicted RBP	13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	ENGASE	Q8NFI3	743 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	LMO3	Q8TAP4	145 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	TTC17	Q96AE7	1141 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	LRIG1	Q96JA1	1093 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	OMD	Q99983	421 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	PCED1A	Q9H1Q7	454 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	SGK2	Q9HBY8	427 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	AASDHPPT	Q9NRN7	309 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	COX16	Q9P0S2	106 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	MAN1B1	Q9UKM7	699 aa		13.99	□□□□□ -0.17
TCF4-262	ENST00000628078	GOLGA4	Q13439	2230 aa	Known RBP	13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	CAPN9	O14815	690 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	RNASEH1	O60930	286 aa	Known RBP	13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	CTSK	P43235	329 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	GRIA4	P48058	902 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	CCT8	P50990	548 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	NUCB2	P80303	420 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	ZBTB16	Q05516	673 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	KCNJ12	Q14500	433 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	MPP7	Q5T2T1	576 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	PDZD3	Q86UT5	571 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	TAC4	Q86UU9	113 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	CREBRF	Q8IUR6	639 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	STK40	Q8N2I9	435 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	EHBP1	Q8NDI1	1231 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	IGSF8	Q969P0	613 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	CRELD1	Q96HD1	420 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	HSFY1	Q96LI6	401 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	KREMEN1	Q96MU8	473 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	FAM129B	Q96TA1	746 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	METTL14	Q9HCE5	456 aa	Known RBP	13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	TJP2	Q9UDY2	1190 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	CTNND2	Q9UQB3	1225 aa		13.98	□□□□□ -0.17
TCF4-262	ENST00000628078	PCDHGB2	Q9Y5G2	931 aa		13.98	□□□□□ -0.17

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