RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 PRICKLE1Q96MT3 831 aaPredicted RBP17.12■□□□□ 0.33
TRIM29-221ENST00000627238 DDX50Q9BQ39 737 aaKnown RBP17.12■□□□□ 0.33
TRIM29-221ENST00000627238 ZSWIM1Q9BR11 485 aa17.12■□□□□ 0.33
TRIM29-221ENST00000627238 METTL14Q9HCE5 456 aaKnown RBP17.12■□□□□ 0.33
TRIM29-221ENST00000627238 INTS6Q9UL03 887 aaKnown RBP17.12■□□□□ 0.33
TRIM29-221ENST00000627238 TPX2Q9ULW0 747 aaKnown RBP17.12■□□□□ 0.33
TRIM29-221ENST00000627238 ITIH6Q6UXX5 1313 aa17.12■□□□□ 0.33
TRIM29-221ENST00000627238 NYNRINQ9P2P1 1898 aaKnown RBP17.12■□□□□ 0.33
TRIM29-221ENST00000627238 A0A1B0GTQ1 180 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 A0A1W2PPC4 97 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 H0Y8X5 98 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 FSBPO95073 299 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 FYNP06241 537 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 FMO5P49326 533 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 PMS1P54277 932 aaKnown RBP17.11■□□□□ 0.33
TRIM29-221ENST00000627238 TBX4P57082 545 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 PNOCQ13519 176 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 INAVAQ3KP66 663 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 NADSYN1Q6IA69 706 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 RFWD3Q6PCD5 774 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 TMEM270Q6UE05 265 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 MFN1Q8IWA4 741 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 FMR1NBQ8N0W7 255 aaPredicted RBP17.11■□□□□ 0.33
TRIM29-221ENST00000627238 SLC39A13Q96H72 371 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 FCRL2Q96LA5 508 aaPredicted RBP17.11■□□□□ 0.33
TRIM29-221ENST00000627238 SERPINB11Q96P15 392 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 FZD4Q9ULV1 537 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 NCKAP1Q9Y2A7 1128 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 TLR6Q9Y2C9 796 aa17.11■□□□□ 0.33
TRIM29-221ENST00000627238 GOLGA6L7A0A1B0GV03 622 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 TARSL2A2RTX5 802 aaKnown RBP17.1■□□□□ 0.33
TRIM29-221ENST00000627238 RNF225M0QZC1 329 aaPredicted RBP17.1■□□□□ 0.33
TRIM29-221ENST00000627238 P4HA2O15460 535 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 RNASEH1O60930 286 aaKnown RBP17.1■□□□□ 0.33
TRIM29-221ENST00000627238 SRPRAP08240 638 aaKnown RBP17.1■□□□□ 0.33
TRIM29-221ENST00000627238 CSKP41240 450 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 GALCP54803 685 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 ST8SIA6P61647 398 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 MEA1Q16626 185 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 COL28A1Q2UY09 1125 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 KCNT1Q5JUK3 1230 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 C9orf64Q5T6V5 341 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 FOXR2Q6PJQ5 311 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 LMO3Q8TAP4 145 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 NT5C1BQ96P26 610 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 ACE2Q9BYF1 805 aaPredicted RBP17.1■□□□□ 0.33
TRIM29-221ENST00000627238 FBXL12Q9NXK8 326 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 PCDHGA1Q9Y5H4 931 aa17.1■□□□□ 0.33
TRIM29-221ENST00000627238 GOLGA4Q13439 2230 aaKnown RBP17.09■□□□□ 0.33
TRIM29-221ENST00000627238 A0A087WV48 116 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 TYW5A2RUC4 315 aaKnown RBP17.09■□□□□ 0.33
TRIM29-221ENST00000627238 SART1O43290 800 aaKnown RBP17.09■□□□□ 0.33
TRIM29-221ENST00000627238 SIN3BO75182 1162 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 CDK4P11802 303 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 RGS7P49802 495 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 GCNT1Q02742 428 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 CST6Q15828 149 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 SOWAHCQ53LP3 525 aaPredicted RBP17.09■□□□□ 0.33
TRIM29-221ENST00000627238 MS4A13Q5J8X5 152 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 C19orf48Q6RUI8 117 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 SCUBE3Q8IX30 993 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 PDCD7Q8N8D1 485 aaKnown RBP17.09■□□□□ 0.33
TRIM29-221ENST00000627238 OR2T34Q8NGX1 318 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 DQX1Q8TE96 717 aaKnown RBP17.09■□□□□ 0.33
TRIM29-221ENST00000627238 CLEC4CQ8WTT0 213 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 FAM131CQ96AQ9 280 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 CEP63Q96MT8 703 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 ELF4Q99607 663 aaPredicted RBP17.09■□□□□ 0.33
TRIM29-221ENST00000627238 SERGEFQ9UGK8 458 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 RAXQ9Y2V3 346 aa17.09■□□□□ 0.33
TRIM29-221ENST00000627238 URB1O60287 2271 aaKnown RBP17.08■□□□□ 0.33
TRIM29-221ENST00000627238 A0A1W2PR77 199 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 TRABD2BA6NFA1 517 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 M0QYV0 167 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 YKT6O15498 198 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 CCR5P51681 352 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 RPS24P62847 133 aaKnown RBP17.08■□□□□ 0.32
TRIM29-221ENST00000627238 LRMPQ12912 555 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 LAYNQ6UX15 382 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 ADAT2Q7Z6V5 191 aaKnown RBP17.08■□□□□ 0.32
TRIM29-221ENST00000627238 TMPRSS12Q86WS5 348 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 STK32AQ8WU08 396 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 SKA1Q96BD8 255 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 MYEOVQ96EZ4 313 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 TRIM62Q9BVG3 475 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 MTG2Q9H4K7 406 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 EBF2Q9HAK2 575 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 CNTN6Q9UQ52 1028 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 ERVW-1Q9UQF0 538 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 PCDHB4Q9Y5E5 795 aa17.08■□□□□ 0.32
TRIM29-221ENST00000627238 GCN1Q92616 2671 aaKnown RBP17.08■□□□□ 0.32
TRIM29-221ENST00000627238 KNTC1P50748 2209 aa17.07■□□□□ 0.32
TRIM29-221ENST00000627238 EDDM13A0A1B0GTR0 161 aa17.07■□□□□ 0.32
TRIM29-221ENST00000627238 TRIM49BA6NDI0 452 aa17.07■□□□□ 0.32
TRIM29-221ENST00000627238 LRRC72A6NJI9 287 aa17.07■□□□□ 0.32
TRIM29-221ENST00000627238 KCNK3O14649 394 aa17.07■□□□□ 0.32
TRIM29-221ENST00000627238 MID1O15344 667 aa17.07■□□□□ 0.32
TRIM29-221ENST00000627238 LUC7L3O95232 432 aaKnown RBP17.07■□□□□ 0.32
TRIM29-221ENST00000627238 SMC2O95347 1197 aa17.07■□□□□ 0.32
TRIM29-221ENST00000627238 C1SP09871 688 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms