RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 HAPLN3Q96S86 360 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 PPP1R9BQ96SB3 815 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 ADAM33Q9BZ11 813 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 CACNA2D2Q9NY47 1150 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 SMG5Q9UPR3 1016 aaKnown RBP17.3■□□□□ 0.36
UBE3D-208ENST00000626828 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 VPS13AQ96RL7 3174 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 A0A1W2PQF6 199 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 TCRBV21S2A2A0A5A6 115 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 ANKRD62A6NC57 917 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 MOCS3O95396 460 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 SKILP12757 684 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 CD70P32970 193 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 RDXP35241 583 aaKnown RBP17.29■□□□□ 0.36
UBE3D-208ENST00000626828 RFC1P35251 1148 aaPredicted RBP17.29■□□□□ 0.36
UBE3D-208ENST00000626828 PTPN9P43378 593 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 ATP11AP98196 1134 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 SLC12A1Q13621 1099 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 ZNF234Q14588 700 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 STARD3Q14849 445 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 C5orf22Q49AR2 442 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 LAIR1Q6GTX8 287 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 WDR59Q6PJI9 974 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 LRRC31Q6UY01 552 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 MDGA1Q8NFP4 955 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 JOSD2Q8TAC2 188 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 WFDC5Q8TCV5 224 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 HMGB4Q8WW32 186 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 CENPIQ92674 756 aaPredicted RBP17.29■□□□□ 0.36
UBE3D-208ENST00000626828 TTC17Q96AE7 1141 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 RPRD1AQ96P16 312 aaPredicted RBP17.29■□□□□ 0.36
UBE3D-208ENST00000626828 BCCIPQ9P287 314 aaKnown RBP eCLIP17.29■□□□□ 0.36
UBE3D-208ENST00000626828 WDR87Q6ZQQ6 2873 aa17.29■□□□□ 0.36
UBE3D-208ENST00000626828 RALGAPA1Q6GYQ0 2036 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 ITIH6Q6UXX5 1313 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 GVINP1Q7Z2Y8 2422 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 EML5Q05BV3 1969 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 A0A1B0GVM2 712 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 TCAF2A6NFQ2 919 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 SYNCRIPO60506 623 aaKnown RBP17.28■□□□□ 0.36
UBE3D-208ENST00000626828 RTN2O75298 545 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 ASLP04424 464 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 DLDP09622 509 aaKnown RBP17.28■□□□□ 0.36
UBE3D-208ENST00000626828 IL12RB1P42701 662 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 LMAN2Q12907 356 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 ARL13BQ3SXY8 428 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 FSCBQ5H9T9 825 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 E4F1Q66K89 784 aaPredicted RBP17.28■□□□□ 0.36
UBE3D-208ENST00000626828 DNAJC24Q6P3W2 148 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 STRADAQ7RTN6 431 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 C11orf74Q86VG3 221 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 VPS36Q86VN1 386 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 CCAR2Q8N163 923 aaKnown RBP17.28■□□□□ 0.36
UBE3D-208ENST00000626828 RNF214Q8ND24 703 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 OLIG1Q8TAK6 271 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 SORCS1Q8WY21 1168 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 IGSF8Q969P0 613 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 ZC3H10Q96K80 434 aaKnown RBP17.28■□□□□ 0.36
UBE3D-208ENST00000626828 TPSD1Q9BZJ3 242 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 TAS2R14Q9NYV8 317 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 NCDNQ9UBB6 729 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 SUN2Q9UH99 717 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 GMEB2Q9UKD1 530 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 VANGL2Q9ULK5 521 aa17.28■□□□□ 0.36
UBE3D-208ENST00000626828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.27■□□□□ 0.36
UBE3D-208ENST00000626828 TCRBV5S1A1TA0A578 114 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 DRGXA6NNA5 263 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 TMCO5BA8MYB1 307 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 DDX3XO00571 662 aaKnown RBP eCLIP17.27■□□□□ 0.36
UBE3D-208ENST00000626828 CLDN11O75508 207 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 GJB6O95452 261 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 FTLP02792 175 aaPredicted RBP17.27■□□□□ 0.36
UBE3D-208ENST00000626828 SERPING1P05155 500 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 GABRG2P18507 467 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 GPD1P21695 349 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 RRM1P23921 792 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 ADRA1BP35368 520 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 PLK1P53350 603 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 ATXN1P54253 815 aaKnown RBP17.27■□□□□ 0.36
UBE3D-208ENST00000626828 ZNF177Q13360 481 aaPredicted RBP17.27■□□□□ 0.36
UBE3D-208ENST00000626828 C15orf59Q2T9L4 293 aaPredicted RBP17.27■□□□□ 0.36
UBE3D-208ENST00000626828 KIAA1211LQ6NV74 962 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 DCUN1D2Q6PH85 259 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 SERPINA13PQ6UXR4 307 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 C14orf80Q86SX3 495 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 FAM131BQ86XD5 332 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 LOXL4Q96JB6 756 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 HINFPQ9BQA5 517 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 CD248Q9HCU0 757 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 ANLNQ9NQW6 1124 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 PARVAQ9NVD7 372 aa17.27■□□□□ 0.36
UBE3D-208ENST00000626828 RHOBTB1O94844 696 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 EPHX1P07099 455 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 RETP07949 1114 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 DESP17661 470 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 CASP14P31944 242 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 CSKP41240 450 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 ZNF143P52747 638 aaPredicted RBP17.26■□□□□ 0.35
UBE3D-208ENST00000626828 CDH4P55283 916 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 ST8SIA6P61647 398 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms