RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 OMDQ99983 421 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 TREX2Q9BQ50 279 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 TCHPQ9BT92 498 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 TEKT3Q9BXF9 490 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 CALN1Q9BXU9 219 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 BEX2Q9BXY8 128 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 DCLK3Q9C098 648 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ZNF696Q9H7X3 374 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 FBRSQ9HAH7 460 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 SLC38A7Q9NVC3 462 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 BEX4Q9NWD9 120 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 DDX43Q9NXZ2 648 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 GPR83Q9NYM4 423 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 IL17CQ9P0M4 197 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 GCNT4Q9P109 453 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 LRFN1Q9P244 771 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 C5AR2Q9P296 337 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 CFAP97Q9P2B7 532 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 WDR35Q9P2L0 1181 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 MAGEC2Q9UBF1 373 aaPredicted RBP3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 VPS51Q9UID3 782 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 PILRAQ9UKJ1 303 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 SCML1Q9UN30 329 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 DMTF1Q9Y222 760 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 NTNG1Q9Y2I2 539 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 WBP11Q9Y2W2 641 aaKnown RBP3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 SH3BP1Q9Y3L3 701 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 RPS6KL1Q9Y6S9 549 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 TENM3Q9P273 2699 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 TENM1Q9UKZ4 2725 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 PTPRJQ12913 1337 aa3.19□□□□□ -1.9
SCARNA15.3-201ENST00000626315 IGKV6-21A0A0C4DH24 114 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 A0A1W2PQM1 296 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 C2orf78A6NCI8 922 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 TRIM64A6NGJ6 449 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 TRIM64BA6NI03 449 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 A6NL46 340 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ESPNB1AK53 854 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 NEDD8-MDP1E9PL57 170 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 PRAMEF26H0Y7S4 382 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 E2F3O00716 465 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 MEIS2O14770 477 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 HGSO14964 777 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 AQP9O43315 295 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ORC4O43929 436 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 KLHL41O60662 606 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 RNASEH1O60930 286 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 CREG1O75629 220 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 CTAG2O75638 210 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 RNASEH2AO75792 299 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ATE1O95260 518 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 LARGE1O95461 756 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 RECKO95980 971 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ALPPP05187 535 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ANXA6P08133 673 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 PLEKP08567 350 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 FURINP09958 794 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 FGF3P11487 239 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 BRAFP15056 766 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 HMGA1P17096 107 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 PFKLP17858 780 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ARF4P18085 180 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 CASP14P31944 242 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 RPL9P32969 192 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 HSPA4P34932 840 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 SOX18P35713 384 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 CA7P43166 264 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 KCNK10P57789 538 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 RPS14P62263 151 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 MYL7Q01449 175 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 PRKCEQ02156 737 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 SMARCB1Q12824 385 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 SNTB1Q13884 538 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 C16orf72Q14CZ0 275 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 NAB2Q15742 525 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ARHGAP44Q17R89 818 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 FOXD4L6Q3SYB3 417 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 MAP9Q49MG5 647 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 SLC39A12Q504Y0 691 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 FNDC3BQ53EP0 1204 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 CEP55Q53EZ4 464 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 CCDC178Q5BJE1 867 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ZNF542PQ5EBM4 170 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ARSHQ5FYA8 562 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 EFHC2Q5JST6 749 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ZNF776Q68DI1 518 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 FCRL6Q6DN72 434 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 FAM180AQ6UWF9 173 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 FOXD4L3Q6VB84 417 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 NYAP1Q6ZVC0 841 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 DHX32Q7L7V1 743 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 LYSMD3Q7Z3D4 306 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 SLC47A2Q86VL8 602 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 MEX3DQ86XN8 651 aaKnown RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 TMEM25Q86YD3 366 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 Q8N9G6 341 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 ZNF548Q8NEK5 533 aaPredicted RBP3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 FDCSPQ8NFU4 85 aa3.18□□□□□ -1.9
SCARNA15.3-201ENST00000626315 OR6C4Q8NGE1 309 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms