RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 HCN2Q9UL51 889 aa14.44□□□□□ -0.1
PCDHGC3-208ENST00000622836 VANGL2Q9ULK5 521 aa14.44□□□□□ -0.1
PCDHGC3-208ENST00000622836 CAPN11Q9UMQ6 739 aa14.44□□□□□ -0.1
PCDHGC3-208ENST00000622836 RAD54BQ9Y620 910 aa14.44□□□□□ -0.1
PCDHGC3-208ENST00000622836 HS3ST4Q9Y661 456 aa14.44□□□□□ -0.1
PCDHGC3-208ENST00000622836 STON1Q9Y6Q2 735 aa14.44□□□□□ -0.1
PCDHGC3-208ENST00000622836 ITIH6Q6UXX5 1313 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 WASH3PC4AMC7 463 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 ATP5BP06576 529 aaKnown RBP14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 TPM1P09493 284 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 GPD1P21695 349 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 RRM1P23921 792 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 HOXD11P31277 338 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 RFC1P35251 1148 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 GSCP56915 257 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 LMAN2Q12907 356 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 ZNF234Q14588 700 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 C15orf59Q2T9L4 293 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 ARL13BQ3SXY8 428 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 LRRC31Q6UY01 552 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 RASSF3Q86WH2 238 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 CIR1Q86X95 450 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 CCAR2Q8N163 923 aaKnown RBP14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 CYB5D2Q8WUJ1 264 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 MCEEQ96PE7 176 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 GABRG3Q99928 467 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 SYT11Q9BT88 431 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 KIAA1522Q9P206 1035 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 GMEB2Q9UKD1 530 aa14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 BZW2Q9Y6E2 419 aaKnown RBP14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 RIF1Q5UIP0 2472 aaKnown RBP14.43□□□□□ -0.1
PCDHGC3-208ENST00000622836 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 A0A1B0GVM2 712 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 TCAF2A6NFQ2 919 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 C2CD4BA6NLJ0 364 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 SIGLEC16A6NMB1 481 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 DDX3XO00571 662 aaKnown RBP eCLIP14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 GYPCP04921 128 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 SERPING1P05155 500 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 EPHX1P07099 455 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 CASP14P31944 242 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 IL12RB1P42701 662 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 PTPN9P43378 593 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 ST8SIA6P61647 398 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 ZNF177Q13360 481 aaPredicted RBP14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 TRIM14Q14142 442 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 FUT11Q495W5 492 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 CCDC14Q49A88 953 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 FSCBQ5H9T9 825 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 ACBD5Q5T8D3 534 aaPredicted RBP14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 TMEM215Q68D42 235 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 SPECC1LQ69YQ0 1117 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 KIAA1211LQ6NV74 962 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 ADIPOR2Q86V24 386 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 SUMF1Q8NBK3 374 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 FAM172AQ8WUF8 416 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 RUBCNQ92622 972 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 SYN2Q92777 582 aaPredicted RBP14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 IGSF8Q969P0 613 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 VCPIP1Q96JH7 1222 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 SPACA7Q96KW9 195 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 PARVAQ9NVD7 372 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 INVSQ9Y283 1065 aa14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 PTPRZ1P23471 2315 aaPredicted RBP14.42□□□□□ -0.1
PCDHGC3-208ENST00000622836 A0A1W2PQF6 199 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 ATMINO43313 823 aaPredicted RBP14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 SRGAP2O75044 1071 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 FTLP02792 175 aaPredicted RBP14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 DLDP09622 509 aaKnown RBP14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 GZMAP12544 262 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 OXCT1P55809 520 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 PITRM1Q5JRX3 1037 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 SH3PXD2AQ5TCZ1 1133 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 RNF219Q5W0B1 726 aaPredicted RBP14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 RNF43Q68DV7 783 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 LAIR1Q6GTX8 287 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 SCYL2Q6P3W7 929 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 WDR59Q6PJI9 974 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 STRADAQ7RTN6 431 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 KIAA0907Q7Z7F0 614 aaPredicted RBP14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 ZNF653Q96CK0 615 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 TRIM11Q96F44 468 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 HAPLN3Q96S86 360 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 PPP1R9BQ96SB3 815 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 ANLNQ9NQW6 1124 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 TMPRSS4Q9NRS4 437 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 ADAMTS1Q9UHI8 967 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 SNX10Q9Y5X0 201 aa14.41□□□□□ -0.1
PCDHGC3-208ENST00000622836 FAM186AA6NE01 2351 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 GPR179Q6PRD1 2367 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 EP300Q09472 2414 aaPredicted RBP14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 DCLK1O15075 740 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 MAP3K13O43283 966 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 CCP110O43303 1012 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 RTN2O75298 545 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 CLDN11O75508 207 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 ENDOD1O94919 500 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 ASLP04424 464 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 HLA-EP13747 358 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms