RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 C14orf80Q86SX3 495 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 GAS2L3Q86XJ1 694 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 AHI1Q8N157 1196 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 ZNF513Q8N8E2 541 aaPredicted RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 KDM1BQ8NB78 822 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 TXNDC5Q8NBS9 432 aaKnown RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 RNF214Q8ND24 703 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 FNIP1Q8TF40 1166 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 BHMTQ93088 406 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 NTAN1Q96AB6 310 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 ALG14Q96F25 216 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 MYO19Q96H55 970 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 TKTL2Q9H0I9 626 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 RAB6CQ9H0N0 254 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 RBSNQ9H1K0 784 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 OSBPL2Q9H1P3 480 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 TMEM245Q9H330 911 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 RETREG1Q9H6L5 497 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 WDCPQ9H6R7 721 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 ARHGAP20Q9P2F6 1191 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 PPARGC1AQ9UBK2 798 aaKnown RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 GGA2Q9UJY4 613 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 INTS6Q9UL03 887 aaKnown RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 SLC8A2Q9UPR5 921 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 NEU3Q9UQ49 428 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 TBC1D30Q9Y2I9 924 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 PAXBP1Q9Y5B6 917 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 OR51B4Q9Y5P0 310 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 R4GN57 208 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 GVINP1Q7Z2Y8 2422 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 GPR179Q6PRD1 2367 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 EML5Q05BV3 1969 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 CFAP54Q96N23 3096 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 A0A1B0GVM2 712 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 TCAF2A6NFQ2 919 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 TMEM191CA6NGB0 347 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 F5H5T6 163 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 MOCS2O96007 188 aaPredicted RBP8.52□□□□□ -1.05
NEK3-209ENST00000618856 FTLP02792 175 aaPredicted RBP8.52□□□□□ -1.05
NEK3-209ENST00000618856 PLEKP08567 350 aaPredicted RBP8.52□□□□□ -1.05
NEK3-209ENST00000618856 MYBL1P10243 752 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 PABPC1P11940 636 aaKnown RBP8.52□□□□□ -1.05
NEK3-209ENST00000618856 GPD1P21695 349 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 SDC4P31431 198 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 ADRA1BP35368 520 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 IL12RB1P42701 662 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 IRAK1P51617 712 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 AIF1P55008 147 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 OGDHQ02218 1023 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 ZNF252P-AS1Q0IIN9 211 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 LMAN2Q12907 356 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 C15orf59Q2T9L4 293 aaPredicted RBP8.52□□□□□ -1.05
NEK3-209ENST00000618856 FUT11Q495W5 492 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 RABGAP1LQ5R372 815 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 DNAJC24Q6P3W2 148 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 SND1Q7KZF4 910 aaKnown RBP eCLIP8.52□□□□□ -1.05
NEK3-209ENST00000618856 PHLDB2Q86SQ0 1253 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 METTL3Q86U44 580 aaKnown RBP8.52□□□□□ -1.05
NEK3-209ENST00000618856 CHSY1Q86X52 802 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 MFN1Q8IWA4 741 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 LGI2Q8N0V4 545 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 CCAR2Q8N163 923 aaKnown RBP8.52□□□□□ -1.05
NEK3-209ENST00000618856 CFAP52Q8N1V2 620 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 CCDC33Q8N5R6 958 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 MDGA1Q8NFP4 955 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 GAB3Q8WWW8 586 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 ATRIPQ8WXE1 791 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 NKD2Q969F2 451 aaPredicted RBP8.52□□□□□ -1.05
NEK3-209ENST00000618856 ZC3H10Q96K80 434 aaKnown RBP8.52□□□□□ -1.05
NEK3-209ENST00000618856 MRGPRX3Q96LB0 322 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 CNPY3Q9BT09 278 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 ZDHHC4Q9NPG8 344 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 TMPRSS4Q9NRS4 437 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 ABCB8Q9NUT2 735 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 PARVAQ9NVD7 372 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 KIAA1522Q9P206 1035 aaPredicted RBP8.52□□□□□ -1.05
NEK3-209ENST00000618856 ADAMTS1Q9UHI8 967 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 STON1Q9Y6Q2 735 aa8.52□□□□□ -1.05
NEK3-209ENST00000618856 CKAP5Q14008 2032 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 PLXND1Q9Y4D7 1925 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 SYNJ2BP-COX16A0A087WUM0 186 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 A0A087X0T9 212 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 CXorf51AA0A1B0GTR3 108 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 SSU72P8A0A1W2PR75 194 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 FAM170AA1A519 330 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 TYW5A2RUC4 315 aaKnown RBP8.51□□□□□ -1.05
NEK3-209ENST00000618856 WASH3PC4AMC7 463 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 AXIN1O15169 862 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 CCP110O43303 1012 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 MFAP3LO75121 409 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 CLDN11O75508 207 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 LMNAP02545 664 aaKnown RBP8.51□□□□□ -1.05
NEK3-209ENST00000618856 ASLP04424 464 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 DLDP09622 509 aaKnown RBP8.51□□□□□ -1.05
NEK3-209ENST00000618856 FAM228BP0C875 321 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 HOXB2P14652 356 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 GABRG2P18507 467 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 MRE11P49959 708 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 CDH4P55283 916 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 OXCT1P55809 520 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms