RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 TMEM63AO94886 807 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 HSPA1AP0DMV8 641 aaKnown RBP11.6□□□□□ -0.55
CPEB1-216ENST00000618449 HSPA1BP0DMV9 641 aaKnown RBP11.6□□□□□ -0.55
CPEB1-216ENST00000618449 YWHAQP27348 245 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 TPI1P60174 286 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 SF3A3Q12874 501 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPEB1-216ENST00000618449 SPRED3Q2MJR0 410 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 SLC45A4Q5BKX6 768 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 FNBP1LQ5T0N5 605 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 PPP1R21Q6ZMI0 780 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 ARHGEF18Q6ZSZ5 1173 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 CDKL3Q8IVW4 592 aaPredicted RBP11.6□□□□□ -0.55
CPEB1-216ENST00000618449 SLC39A11Q8N1S5 342 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 ATP11CQ8NB49 1132 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 C2orf15Q8WU43 125 aaKnown RBP11.6□□□□□ -0.55
CPEB1-216ENST00000618449 ZNF558Q96NG5 402 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 PRDM16Q9HAZ2 1276 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 FGFR1OP2Q9NVK5 253 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 ARHGEF38Q9NXL2 777 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 BACE2Q9Y5Z0 518 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 TCRBV7S3A2A0A539 114 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 E7ESA3 106 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 H0YHG0 523 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 SMAPO00193 183 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 OAS1P00973 400 aaKnown RBP11.6□□□□□ -0.55
CPEB1-216ENST00000618449 SOD2P04179 222 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 ERCC2P18074 760 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 STX2P32856 288 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 GPX6P59796 221 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 BASP1P80723 227 aaKnown RBP11.6□□□□□ -0.55
CPEB1-216ENST00000618449 MSS51Q4VC12 460 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 CCT6BQ92526 530 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 FBXO32Q969P5 355 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 TMEM169Q96HH4 297 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 SPATA17Q96L03 361 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 QKIQ96PU8 341 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPEB1-216ENST00000618449 CLSTN3Q9BQT9 956 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 KDM4CQ9H3R0 1056 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 PSMC3IPQ9P2W1 217 aaPredicted RBP11.6□□□□□ -0.55
CPEB1-216ENST00000618449 SLC24A2Q9UI40 661 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 NR2E3Q9Y5X4 410 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 PLXNA3P51805 1871 aa11.6□□□□□ -0.55
CPEB1-216ENST00000618449 FAM47DPA6NHR8 397 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 CCT8L1PA6NM43 557 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 EFCAB14O75071 495 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 LRIG2O94898 1065 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 RTN3O95197 1032 aaPredicted RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 ATF6P18850 670 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 PHBP35232 272 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 HCAR3P49019 387 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 SATB1Q01826 763 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 TAF10Q12962 218 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 PAFAH1B3Q15102 231 aaKnown RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 LACTB2Q53H82 288 aaPredicted RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 C16orf59Q7L2K0 433 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 TP53INP2Q8IXH6 220 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 CMTR2Q8IYT2 770 aaKnown RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 CNPY4Q8N129 248 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 ARHGAP18Q8N392 663 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 GIPC2Q8TF65 315 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 PYROXD1Q8WU10 500 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 TGS1Q96RS0 853 aaKnown RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 LGMNQ99538 433 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 WDR83Q9BRX9 315 aaKnown RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 TRABDQ9H4I3 376 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 XPO7Q9UIA9 1087 aaKnown RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 SNX3O60493 162 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 CCR1P32246 355 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 RPL10AP62906 217 aaKnown RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 RASA2Q15283 850 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 BRMS1LQ5PSV4 323 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 RASIP1Q5U651 963 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 BZW1Q7L1Q6 419 aaKnown RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 COLGALT1Q8NBJ5 622 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 FBXO36Q8NEA4 188 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 CCDC110Q8TBZ0 833 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 TFB1MQ8WVM0 346 aaKnown RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 MAGEB18Q96M61 343 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 SERPINB11Q96P15 392 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 EPAS1Q99814 870 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 SIK2Q9H0K1 926 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 OSBPL2Q9H1P3 480 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 SENP1Q9P0U3 644 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 PAK5Q9P286 719 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 ZMYND8Q9ULU4 1186 aaPredicted RBP11.59□□□□□ -0.55
CPEB1-216ENST00000618449 SUFUQ9UMX1 484 aa11.59□□□□□ -0.55
CPEB1-216ENST00000618449 PRPF4O43172 522 aaKnown RBP eCLIP11.58□□□□□ -0.56
CPEB1-216ENST00000618449 SPAG7O75391 227 aa11.58□□□□□ -0.56
CPEB1-216ENST00000618449 PAGE1O75459 146 aa11.58□□□□□ -0.56
CPEB1-216ENST00000618449 BAIAP3O94812 1187 aa11.58□□□□□ -0.56
CPEB1-216ENST00000618449 TBX18O95935 607 aa11.58□□□□□ -0.56
CPEB1-216ENST00000618449 VAV1P15498 845 aa11.58□□□□□ -0.56
CPEB1-216ENST00000618449 LAG3P18627 525 aa11.58□□□□□ -0.56
CPEB1-216ENST00000618449 KRT15P19012 456 aa11.58□□□□□ -0.56
CPEB1-216ENST00000618449 EPHB2P29323 1055 aa11.58□□□□□ -0.56
CPEB1-216ENST00000618449 DSG1Q02413 1049 aa11.58□□□□□ -0.56
CPEB1-216ENST00000618449 EFTUD2Q15029 972 aaKnown RBP eCLIP11.58□□□□□ -0.56
CPEB1-216ENST00000618449 ZKSCAN8Q15776 578 aaPredicted RBP11.58□□□□□ -0.56
CPEB1-216ENST00000618449 BBS9Q3SYG4 887 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms