RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 M0R036 132 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 MGRN1O60291 552 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 GLI1P08151 1106 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 TMEM253P0C7T8 217 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 MFSD14BQ5SR56 506 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 C10orf107Q8IVU9 208 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 SNIP1Q8TAD8 396 aaKnown RBP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 PADI4Q9UM07 663 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 MPOP05164 745 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 PRKCQQ04759 706 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 KCTD2Q14681 263 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 RHEBQ15382 184 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 DCAF15Q66K64 600 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 PDXDC2PQ6P474 469 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 SMIM5Q71RC9 77 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 CHPFQ8IZ52 775 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 LAMC1P11047 1609 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 KLRC1P26715 233 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 MAGEA6P43360 314 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 RPL6Q02878 288 aaKnown RBP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 ARHGAP15Q53QZ3 475 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 HDDC3Q8N4P3 179 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 C11orf24Q96F05 449 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 SLC25A23Q9BV35 468 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 SIK2Q9H0K1 926 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 RDH8Q9NYR8 311 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 PBRM1Q86U86 1689 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 C9IYK1 514 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 PRG2P13727 222 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 OMPP47874 163 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 GJA9P57773 515 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 MED22Q15528 200 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 SYNPOQ8N3V7 929 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 ZNF717Q9BY31 904 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-208ENST00000618395 MAFFQ9ULX9 164 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 CLEC4AQ9UMR7 237 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 DHRS7Q9Y394 339 aa15.32■□□□□ 0.04
COL5A1-208ENST00000618395 PRH1P02810 166 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 CDK17Q00537 523 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 TXNRD1Q16881 649 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 DUOXA2Q1HG44 320 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 FGD3Q5JSP0 725 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 C11orf63Q6NUN7 778 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 ELOA2Q8IYF1 753 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-208ENST00000618395 FBXO25Q8TCJ0 367 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 KBTBD7Q8WVZ9 684 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 RAB27AP51159 221 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 JAK3P52333 1124 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 SATL1Q86VE3 508 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 CMTR2Q8IYT2 770 aaKnown RBP15.31■□□□□ 0.04
COL5A1-208ENST00000618395 POP5Q969H6 163 aaKnown RBP15.31■□□□□ 0.04
COL5A1-208ENST00000618395 POLR3BQ9NW08 1133 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-208ENST00000618395 UCKL1Q9NWZ5 548 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 WDR19Q8NEZ3 1342 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 MAP2K7O14733 419 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 AFF1P51825 1210 aaKnown RBP15.31■□□□□ 0.04
COL5A1-208ENST00000618395 SLC5A3P53794 718 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 OR2B6P58173 313 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 ADCK2Q7Z695 626 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 ARID1BQ8NFD5 2236 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-208ENST00000618395 EML1O00423 815 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 DHX15O43143 795 aaKnown RBP15.31■□□□□ 0.04
COL5A1-208ENST00000618395 PKNOX1P55347 436 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 FAM76BQ5HYJ3 339 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 TMEM17Q86X19 198 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 MPP5Q8N3R9 675 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 CST8O60676 142 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 NUDT7P0C024 238 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 YWHAQP27348 245 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 AP3M2P53677 418 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 NXNL1Q96CM4 212 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 NOL11Q9H8H0 719 aaKnown RBP15.31■□□□□ 0.04
COL5A1-208ENST00000618395 AFF2P51816 1311 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 FMO5P49326 533 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 TMC7Q7Z402 723 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 SULF1Q8IWU6 871 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 TBC1D21Q8IYX1 336 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 NSUN6Q8TEA1 469 aaKnown RBP15.31■□□□□ 0.04
COL5A1-208ENST00000618395 BHLHE41Q9C0J9 482 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-208ENST00000618395 EHD4Q9H223 541 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 RPS6KB2Q9UBS0 482 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 ALG5Q9Y673 324 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 TNRQ92752 1358 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 MYOM2P54296 1465 aa15.31■□□□□ 0.04
COL5A1-208ENST00000618395 KIF28PB7ZC32 967 aa15.3■□□□□ 0.04
COL5A1-208ENST00000618395 OR7A10O76100 309 aa15.3■□□□□ 0.04
COL5A1-208ENST00000618395 TTI2Q6NXR4 508 aa15.3■□□□□ 0.04
COL5A1-208ENST00000618395 CHERPQ8IWX8 916 aaKnown RBP15.3■□□□□ 0.04
COL5A1-208ENST00000618395 DARSP14868 501 aaKnown RBP15.3■□□□□ 0.04
COL5A1-208ENST00000618395 GLRBP48167 497 aa15.3■□□□□ 0.04
COL5A1-208ENST00000618395 ATP2C1P98194 919 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-208ENST00000618395 AADACL4Q5VUY2 407 aa15.3■□□□□ 0.04
COL5A1-208ENST00000618395 SYCE2Q6PIF2 218 aa15.3■□□□□ 0.04
COL5A1-208ENST00000618395 KYAT3Q6YP21 454 aaKnown RBP15.3■□□□□ 0.04
COL5A1-208ENST00000618395 SAV1Q9H4B6 383 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-208ENST00000618395 KLHL28Q9NXS3 571 aa15.3■□□□□ 0.04
COL5A1-208ENST00000618395 INVSQ9Y283 1065 aa15.3■□□□□ 0.04
COL5A1-208ENST00000618395 KCNIP3Q9Y2W7 256 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms