RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 CWC15Q9P013 229 aaKnown RBP23.38■■□□□ 1.33
CBWD3-213ENST00000618217 AMFRQ9UKV5 643 aa23.38■■□□□ 1.33
CBWD3-213ENST00000618217 CLEC4EQ9ULY5 219 aa23.38■■□□□ 1.33
CBWD3-213ENST00000618217 PCDHA3Q9Y5H8 950 aa23.38■■□□□ 1.33
CBWD3-213ENST00000618217 GOLGA6L9A6NEM1 432 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 SHISA7A6NL88 538 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 CNTN5O94779 1100 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 IL4RP24394 825 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 CTNNA2P26232 953 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 HTR7P34969 479 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 CTNNA1P35221 906 aaKnown RBP23.37■■□□□ 1.33
CBWD3-213ENST00000618217 HCAR3P49019 387 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 PEX5P50542 639 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 PPP6R3Q5H9R7 873 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-213ENST00000618217 TTC39BQ5VTQ0 682 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-213ENST00000618217 PEX26Q7Z412 305 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 C12orf40Q86WS4 652 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 TRIM58Q8NG06 486 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 RAPGEF5Q92565 580 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 EPAS1Q99814 870 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 C3orf70A6NLC5 250 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-213ENST00000618217 CREB3O43889 395 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 CD48P09326 243 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 TNNT1P13805 278 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 GLULP15104 373 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 OPRD1P41143 372 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 ZNF135P52742 658 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-213ENST00000618217 SLC44A4Q53GD3 710 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 CIR1Q86X95 450 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-213ENST00000618217 C17orf53Q8N3J3 647 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-213ENST00000618217 UBE2Q2Q8WVN8 375 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 TBC1D31Q96DN5 1066 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 HES6Q96HZ4 224 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 ZYG11BQ9C0D3 744 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 KLHL11Q9NVR0 708 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 STIM2Q9P246 746 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 WNT16Q9UBV4 365 aa23.37■■□□□ 1.33
CBWD3-213ENST00000618217 GOT1P17174 413 aa23.36■■□□□ 1.33
CBWD3-213ENST00000618217 CTHP32929 405 aa23.36■■□□□ 1.33
CBWD3-213ENST00000618217 CDH6P55285 790 aa23.36■■□□□ 1.33
CBWD3-213ENST00000618217 DPYSL3Q14195 570 aa23.36■■□□□ 1.33
CBWD3-213ENST00000618217 PDK2Q15119 407 aa23.36■■□□□ 1.33
CBWD3-213ENST00000618217 NAIF1Q69YI7 327 aaPredicted RBP23.36■■□□□ 1.33
CBWD3-213ENST00000618217 CHST9Q7L1S5 443 aa23.36■■□□□ 1.33
CBWD3-213ENST00000618217 NLRP14Q86W24 1093 aa23.36■■□□□ 1.33
CBWD3-213ENST00000618217 KATNAL2Q8IYT4 538 aa23.36■■□□□ 1.33
CBWD3-213ENST00000618217 C8orf33Q9H7E9 229 aaPredicted RBP23.36■■□□□ 1.33
CBWD3-213ENST00000618217 DDX56Q9NY93 547 aaKnown RBP23.36■■□□□ 1.33
CBWD3-213ENST00000618217 PACSIN2Q9UNF0 486 aaPredicted RBP23.36■■□□□ 1.33
CBWD3-213ENST00000618217 ZKSCAN5Q9Y2L8 839 aa23.36■■□□□ 1.33
CBWD3-213ENST00000618217 PIAS3Q9Y6X2 628 aa23.36■■□□□ 1.33
CBWD3-213ENST00000618217 A0A1B0GVM2 712 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 CCDC66A2RUB6 948 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 TCAF2A6NFQ2 919 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 SPECC1L-ADORA2AF8WAN1 911 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 EEF2KO00418 725 aaKnown RBP23.35■■□□□ 1.33
CBWD3-213ENST00000618217 TULP3O75386 442 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 CISD3P0C7P0 127 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 KDELR1P24390 212 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 SLC6A11P48066 632 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 CDH4P55283 916 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 DPYSQ14117 519 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 MEI1Q5TIA1 1274 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 ASTLQ6HA08 431 aaPredicted RBP23.35■■□□□ 1.33
CBWD3-213ENST00000618217 TXNDC11Q6PKC3 985 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 RFX8Q6ZV50 586 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 RALGPS2Q86X27 583 aaPredicted RBP23.35■■□□□ 1.33
CBWD3-213ENST00000618217 NAT16Q8N8M0 369 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 KCTD6Q8NC69 237 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 WFDC5Q8TCV5 224 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 ALG3Q92685 438 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 LMLNQ96KR4 655 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 ALS2CR12Q96Q35 445 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 SLC2A11Q9BYW1 496 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 RETREG1Q9H6L5 497 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 RCOR3Q9P2K3 495 aaPredicted RBP23.35■■□□□ 1.33
CBWD3-213ENST00000618217 CHD5Q8TDI0 1954 aa23.35■■□□□ 1.33
CBWD3-213ENST00000618217 TYW5A2RUC4 315 aaKnown RBP23.34■■□□□ 1.33
CBWD3-213ENST00000618217 MIF4GDA9UHW6 222 aaKnown RBP23.34■■□□□ 1.33
CBWD3-213ENST00000618217 DDX3YO15523 660 aaKnown RBP23.34■■□□□ 1.33
CBWD3-213ENST00000618217 CLDN11O75508 207 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 LUC7L3O95232 432 aaKnown RBP23.34■■□□□ 1.33
CBWD3-213ENST00000618217 RHOQP17081 205 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 EPHB2P29323 1055 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 TPI1P60174 286 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 ZXDAP98168 799 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 MESP2Q0VG99 397 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 MMRN1Q13201 1228 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 TAZQ16635 292 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 RWDD4Q6NW29 188 aaKnown RBP23.34■■□□□ 1.33
CBWD3-213ENST00000618217 VSIG1Q86XK7 387 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 PHTF2Q8N3S3 785 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 FIBINQ8TAL6 211 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 CSPG4P5Q96PW8 444 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 TBC1D30Q9Y2I9 924 aa23.34■■□□□ 1.33
CBWD3-213ENST00000618217 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.34■■□□□ 1.33
CBWD3-213ENST00000618217 WASH4PA8MWX3 477 aa23.33■■□□□ 1.33
CBWD3-213ENST00000618217 PI4K2BG5E9Z4 385 aa23.33■■□□□ 1.33
CBWD3-213ENST00000618217 TRIM24O15164 1050 aa23.33■■□□□ 1.33
CBWD3-213ENST00000618217 EIF2DP41214 584 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms