RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 BMP3P12645 472 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 NMT1P30419 496 aaKnown RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 IL6STP40189 918 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ATP5OP48047 213 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ZNF135P52742 658 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 MAPK12P53778 367 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 RPS3AP61247 264 aaKnown RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 C1QBPQ07021 282 aaKnown RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 MMRN1Q13201 1228 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 DGCR6Q14129 220 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ACAP2Q15057 778 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PRKD1Q15139 912 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 RPS6KA2Q15349 733 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PPP1R3AQ16821 1122 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 C5orf22Q49AR2 442 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 FAM182AQ5T1J6 154 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 KCTD1Q719H9 257 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 FAM156AQ8NDB6 213 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 DENND1AQ8TEH3 1009 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 FAF2Q96CS3 445 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 TUBGCP3Q96CW5 907 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 C7orf26Q96N11 449 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ALPK1Q96QP1 1244 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ASPSCR1Q9BZE9 553 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 MIR1-1HGQ9H1L0 117 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 C17orf75Q9HAS0 396 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ACTR3BQ9P1U1 418 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 HMGXB4Q9UGU5 601 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PCDHGB4Q9UN71 923 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PCDHGB5Q9Y5G0 923 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 MYH2Q9UKX2 1941 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 NCANO14594 1321 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 TRIM64A6NGJ6 449 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 TRIM64BA6NI03 449 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 PDPK1O15530 556 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ZW10O43264 779 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 TIPRLO75663 272 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 RFPL2O75678 378 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 TDP2O95551 362 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CYP1A2P05177 515 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CYP2D6P10635 497 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ETS1P14921 441 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CKMT2P17540 419 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 RPL10P27635 214 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 PSMB9P28065 219 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ADCY7P51828 1080 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 P2RX3P56373 397 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 OR2B6P58173 313 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 SLC18A2Q05940 514 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 DSC3Q14574 896 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 PLA2G4EQ3MJ16 856 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CLVS2Q5SYC1 327 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 PLEKHG7Q6ZR37 379 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CHST15Q7LFX5 561 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 IFNEQ86WN2 208 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 PCDH20Q8N6Y1 951 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 GRIN3AQ8TCU5 1115 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CDKL2Q92772 493 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 GLT1D1Q96MS3 346 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 C1orf21Q9H246 121 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 BRD7Q9NPI1 651 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 TMLHEQ9NVH6 421 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 APEX2Q9UBZ4 518 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 PCDHB2Q9Y5E7 798 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 MLLT3P42568 568 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CLCQ05315 142 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 GNA13Q14344 377 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 KIZQ2M2Z5 673 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 SHROOM1Q2M3G4 852 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 C6orf10Q5SRN2 563 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 OTUD3Q5T2D3 398 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ANKRD26P1Q6NSI1 321 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 C16orf46Q6P387 395 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ZNF790Q6PG37 636 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 KCNK18Q7Z418 384 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 OSTM1Q86WC4 334 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CDC26Q8NHZ8 85 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 MAGEE2Q8TD90 523 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 RCN3Q96D15 328 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 IDI2Q9BXS1 227 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 IL1RL2Q9HB29 575 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 AAASQ9NRG9 546 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 BLOC1S4Q9NUP1 217 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 COMMD8Q9NX08 183 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 MKL2Q9ULH7 1088 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 COG5Q9UP83 839 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CDY2AQ9Y6F7 541 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CDY1Q9Y6F8 540 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 MYH15Q9Y2K3 1946 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 KIF13AQ9H1H9 1805 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 GSG1L2A8MUP6 293 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 TMX2-CTNND1H3BSU7 103 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CDK2AP1O14519 115 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 MED26O95402 600 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 IFNA16P05015 189 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 XRCC1P18887 633 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 STAT3P40763 770 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CASP2P42575 452 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 SLC12A2P55011 1212 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms