RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	ATP6V1B2	P21281	511 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	CES1	P23141	567 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	KRT73	Q86Y46	540 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	ABRA	Q8N0Z2	381 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	POP5	Q969H6	163 aa	Known RBP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	CXorf40B	Q96DE9	158 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	PDCD2L	Q9BRP1	358 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	FAM126A	Q9BYI3	521 aa	Predicted RBP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	POLR1E	Q9GZS1	481 aa	Known RBP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	DNMT3L	Q9UJW3	386 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	ANKDD1B	A6NHY2	528 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	BIRC5	O15392	142 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	FTH1	P02794	183 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	GYS1	P13807	737 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	CALB2	P22676	271 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	IGFBP4	P22692	258 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	CTNNB1	P35222	781 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	HNMT	P50135	292 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	ERVK-9	P63128	1117 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	ERVK-24	P63145	666 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	VAC14	Q08AM6	782 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	STX4	Q12846	297 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	MSLN	Q13421	630 aa	Predicted RBP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	CRYM	Q14894	314 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	DOK6	Q6PKX4	331 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	KLHL24	Q6TFL4	600 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	PTAR1	Q7Z6K3	402 aa	Predicted RBP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	MILR1	Q7Z6M3	343 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	KCNMB4	Q86W47	210 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	ARID3B	Q8IVW6	561 aa	Predicted RBP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	ACTRT1	Q8TDG2	376 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	C18orf25	Q96B23	403 aa	Predicted RBP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	ACSF2	Q96CM8	615 aa	Predicted RBP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	PAFAH2	Q99487	392 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	CHP1	Q99653	195 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	FAM118B	Q9BPY3	351 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	MYLK2	Q9H1R3	596 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	PIGU	Q9H490	435 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	KLHL31	Q9H511	634 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	POPDC2	Q9HBU9	364 aa		7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	A1CF	Q9NQ94	594 aa	Known RBP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	MRTO4	Q9UKD2	239 aa	Known RBP	7.52	□□□□□ -1.21
PCDH15-231	ENST00000617271	NWD1	Q149M9	1564 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	ADH1A	P07327	375 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	CXCL8	P10145	99 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	HTR1B	P28222	390 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	SERPINB3	P29508	390 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	WEE1	P30291	646 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	GYS2	P54840	703 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	MRPS35	P82673	323 aa	Known RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	MRPS6	P82932	125 aa	Known RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	BHLHB9	Q6PI77	547 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	IKBIP	Q70UQ0	350 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	CAMK1D	Q8IU85	385 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	ULK2	Q8IYT8	1036 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	ZNF786	Q8N393	782 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	HEXDC	Q8WVB3	486 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	RERG	Q96A58	199 aa	Predicted RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	ARHGEF3	Q9NR81	526 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	PRKAG3	Q9UGI9	489 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	PSME2	Q9UL46	239 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	RIMS1	Q86UR5	1692 aa	Known RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	SNUPN	O95149	360 aa	Known RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	HNRNPC	P07910	306 aa	Known RBP eCLIP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	TFE3	P19532	575 aa	Predicted RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	S100G	P29377	79 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	MMP13	P45452	471 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	ADIG	Q0VDE8	80 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	KPNB1	Q14974	876 aa	Known RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	TOMM20	Q15388	145 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	FIGN	Q5HY92	759 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	ZDHHC20	Q5W0Z9	365 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	TMEM154	Q6P9G4	183 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	GJB7	Q6PEY0	223 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	KDM7A	Q6ZMT4	941 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	CCDC103	Q8IW40	242 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	CPA6	Q8N4T0	437 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	HJURP	Q8NCD3	748 aa	Predicted RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	RNFT2	Q96EX2	444 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	TMEM134	Q9H6X4	195 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	CATSPERZ	Q9NTU4	200 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	INTS7	Q9NVH2	962 aa	Known RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	GPATCH2L	Q9NWQ4	482 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	POLL	Q9UGP5	575 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	COQ6	Q9Y2Z9	468 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271		E9PCH4	1651 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	CCDC154	A6NI56	674 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	KRT33A	O76009	404 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	CAT	P04040	527 aa	Known RBP	7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	UMPS	P11172	480 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	MYL12A	P19105	171 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	FKBP1B	P68106	108 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	SLC6A3	Q01959	620 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	ORC1	Q13415	861 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	INA	Q16352	499 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	INSC	Q1MX18	579 aa		7.51	□□□□□ -1.21
PCDH15-231	ENST00000617271	FKBP1C	Q5VVH2	108 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms