RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ZMYM2Q9UBW7 1377 aa10.88□□□□□ -0.67
CLTCL1-209ENST00000617103 A0A0B4J269 797 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 HACD1B0YJ81 288 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 TRIM38O00635 465 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 TNFRSF21O75509 655 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 SEC24AO95486 1093 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 TPH1P17752 444 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 EIF4BP23588 611 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 MIPP30301 263 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 GRIA3P42263 894 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 RAP1GAPP47736 663 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 RARRES1P49788 294 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 NEK3P51956 506 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 NAGLUP54802 743 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 PSME3P61289 254 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 TMEM62Q0P6H9 643 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 GPR162Q16538 588 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 AMHR2Q16671 573 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 C10orf120Q5SQS8 335 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 POLE3Q9NRF9 147 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 FBXO28Q9NVF7 368 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 PRG3Q9Y2Y8 225 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 FAM220BPB1ANY3 271 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 LIASO43766 372 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 CYP1A1P04798 512 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 CYP1A2P05177 515 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 CYP2C9P11712 490 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 CCNA2P20248 432 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 RBL1P28749 1068 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 CHKAP35790 457 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 MAGEA10P43363 369 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 KCNT2Q6UVM3 1135 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 KCNK18Q7Z418 384 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 PALB2Q86YC2 1186 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 ADHFE1Q8IWW8 467 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 SAMD3Q8N6K7 520 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 RP9Q8TA86 221 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 ACMSDQ8TDX5 336 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 S100ZQ8WXG8 99 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 BORCS5Q969J3 196 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 GMCL1Q96IK5 515 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 SLITRK1Q96PX8 696 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 ACOX2Q99424 681 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 OSBPL10Q9BXB5 764 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 XPNPEP3Q9NQH7 507 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 GALNT8Q9NY28 637 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 CDH9Q9ULB4 789 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 NRXN1Q9ULB1 1477 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 FRMPD4Q14CM0 1322 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 F8VP50 259 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 TPP1O14773 563 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 GSC2O15499 205 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 VAPBO95292 243 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 GSTM1P09488 218 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 SUPT20HL2P0C7V6 817 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 BST2Q10589 180 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 COX10Q12887 443 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF57Q68EA5 555 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 PRR5LQ6MZQ0 368 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 KRT78Q8N1N4 520 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 B3GALNT2Q8NCR0 500 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 LNX1Q8TBB1 728 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 SPIRE2Q8WWL2 714 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 ATG4CQ96DT6 458 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 ZFP42Q96MM3 310 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 CLK4Q9HAZ1 481 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 NMRK2Q9NPI5 230 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 RBM22Q9NW64 420 aaKnown RBP eCLIP10.87□□□□□ -0.675e-6■■■■□ 22.4
CLTCL1-209ENST00000617103 PRPF19Q9UMS4 504 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 PRR23AA6NEV1 266 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 FSCN2O14926 492 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 KCNQ2O43526 872 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 SLITRK3O94933 977 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 KDELR1P24390 212 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 RXRGP48443 463 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 CCNG1P51959 295 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 MTTPP55157 894 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 TSNQ15631 228 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 LIN52Q52LA3 116 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 RNF220Q5VTB9 566 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF470Q6ECI4 717 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 CES3Q6UWW8 571 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 ILDR2Q71H61 639 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 SEPT12Q8IYM1 358 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF276Q8N554 614 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 POC5Q8NA72 575 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 FAM45AQ8TCE6 357 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 APBA2Q99767 749 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 CEP41Q9BYV8 373 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 FBXO6Q9NRD1 293 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 EURLQ9NYK6 297 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 AP3M1Q9Y2T2 418 aa10.87□□□□□ -0.67
CLTCL1-209ENST00000617103 ASTN2O75129 1339 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 BIRC5O15392 142 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 ALDH1A1P00352 501 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 STAG3L1P0CL83 205 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 CCNHP51946 323 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 KLHL12Q53G59 568 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 SCARA3Q6AZY7 606 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 MFSD5Q6N075 450 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms