RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 TOP2BQ02880 1626 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 POLR3AO14802 1390 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 RFX7Q2KHR2 1363 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SYNMO15061 1565 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF521Q96K83 1311 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 FAM135AQ9P2D6 1515 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 KIF14Q15058 1648 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 AGPSO00116 658 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SSX5O60225 188 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SYNCRIPO60506 623 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PEX11AO75192 247 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 NDUFS6O75380 124 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PIAS2O75928 621 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TMEM63AO94886 807 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PAPLNO95428 1278 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PNPP00491 289 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 GNAI2P04899 355 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 USP17L7P0C7H9 530 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 RARGP13631 454 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 BPIP17213 487 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 MX1P20591 662 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CHMP24386 653 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 GTF2H1P32780 548 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 RFC1P35251 1148 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 IARSP41252 1262 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PIP4K2AP48426 406 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CACNB3P54284 484 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SLC12A3P55017 1021 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 YBEYP58557 167 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TLE2Q04725 743 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 C2orf54Q08AI8 447 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 LASP1Q14847 261 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 KCNJ8Q15842 424 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PTGISQ16647 500 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 HADHQ16836 314 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SKIDA1Q1XH10 827 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ABCB5Q2M3G0 1257 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SMTNL2Q2TAL5 461 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 HSP90AA4PQ58FG1 418 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 KLHDC7AQ5VTJ3 777 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 E4F1Q66K89 784 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ZNF772Q68DY9 489 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PRMT9Q6P2P2 845 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 LRRC69Q6ZNQ3 347 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PLEKHH3Q7Z736 793 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 NEK8Q86SG6 692 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CDH24Q86UP0 819 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 HEATR4Q86WZ0 1026 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ZSWIM9Q86XI8 627 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ANKLE2Q86XL3 938 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 FAM178BQ8IXR5 827 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 KRT78Q8N1N4 520 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ZSCAN18Q8TBC5 510 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 POC1BQ8TC44 478 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 NAT14Q8WUY8 206 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ASB12Q8WXK4 309 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 KISS1RQ969F8 398 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 MARC2Q969Z3 335 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TAAR9Q96RI9 348 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SLC30A3Q99726 388 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CCM2Q9BSQ5 444 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 HEMGNQ9BXL5 484 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 FTOQ9C0B1 505 aaKnown RBP eCLIP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TWSG1Q9GZX9 223 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 UCKL1Q9NWZ5 548 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 GIN1Q9NXP7 522 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 DLGAP2Q9P1A6 1054 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CPNE7Q9UBL6 633 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CACNG4Q9UBN1 327 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 LIMA1Q9UHB6 759 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CYB5R1Q9UHQ9 305 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ATP6V1HQ9UI12 483 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 GINS2Q9Y248 185 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PPIL1Q9Y3C6 166 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SAMM50Q9Y512 469 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 TDRD9Q8NDG6 1382 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 FHOD3Q2V2M9 1422 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 A0A1W2PPL8 197 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 FAM83GA6ND36 823 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 B4E1Z4 1266 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 HSBP1L1C9JCN9 74 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PRSS44E7EML9 344 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 ATP6V1G2-DDX39BF2Z307 99 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 hCG_2039718K7EN88 272 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 FZD9O00144 591 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PER2O15055 1255 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CLOCKO15516 846 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 EFSO43281 561 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PTP4A3O75365 173 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SURF6O75683 361 aaKnown RBP3.12□□□□□ -1.91
CBWD3-209ENST00000614377 SEMA3DO95025 777 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 GAS8O95995 478 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CFBP00751 764 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 POMCP01189 267 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 INHAP05111 366 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 PFKMP08237 780 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CLTBP09497 229 aa3.12□□□□□ -1.91
CBWD3-209ENST00000614377 CHN1P15882 459 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms