RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 CYP4F11Q9HBI6 524 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 FNIP2Q9P278 1114 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 MAFFQ9ULX9 164 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 RAD54BQ9Y620 910 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 PTPRSQ13332 1948 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ALPK3Q96L96 1907 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 NCAM2O15394 837 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 MSI1O43347 362 aaKnown RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 OPA1O60313 960 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 PAGE1O75459 146 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 ZNF189O75820 626 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 FGF18O76093 207 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 LRIG2O94898 1065 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 CSH1P0DML2 217 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 CSH2P0DML3 217 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 RBL1P28749 1068 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 EPHB2P29323 1055 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 ELF1P32519 619 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 ALDH1A3P47895 512 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 TBX4P57082 545 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 FAM193AP78312 1265 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 C10orf120Q5SQS8 335 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 RNASEH2BQ5TBB1 312 aaKnown RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 MRPL14Q6P1L8 145 aaKnown RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 LRIG3Q6UXM1 1119 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 C4orf22Q6V702 233 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 TRMT10CQ7L0Y3 403 aaKnown RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 TADA2BQ86TJ2 420 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 HERC6Q8IVU3 1022 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 PPIL6Q8IXY8 311 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 ZCCHC9Q8N567 271 aaKnown RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 GOLGA6L1Q8N7Z2 621 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 PDZD8Q8NEN9 1154 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 TFB1MQ8WVM0 346 aaKnown RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 SLC39A13Q96H72 371 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 C1orf74Q96LT6 269 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 OLFM3Q96PB7 478 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 QKIQ96PU8 341 aaKnown RBP eCLIP9.19□□□□□ -0.941e-9■■■■■ 189.5
CCDC47-207ENST00000612558 CDK5RAP1Q96SZ6 601 aaKnown RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 FERMT1Q9BQL6 677 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 PABPC3Q9H361 631 aaKnown RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 CXXC1Q9P0U4 656 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 PAK5Q9P286 719 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 SLC12A6Q9UHW9 1150 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 MAGED2Q9UNF1 606 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-207ENST00000612558 SHOC2Q9UQ13 582 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 PLAAQ9Y263 795 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 MFHAS1Q9Y4C4 1052 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 SLC4A7Q9Y6M7 1214 aa9.19□□□□□ -0.94
CCDC47-207ENST00000612558 PPP1R12AO14974 1030 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-207ENST00000612558 MFSD11O43934 449 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 LILRB3O75022 631 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 GCATO75600 419 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 MAP3K6O95382 1288 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 SYF2O95926 243 aaKnown RBP9.18□□□□□ -0.94
CCDC47-207ENST00000612558 TBX18O95935 607 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 LINC00271P0C7V0 271 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 CTSAP10619 480 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 SERPINB6P35237 376 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 CHKAP35790 457 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 KPNA1P52294 538 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-207ENST00000612558 MLLT6P55198 1093 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-207ENST00000612558 NRG1Q02297 640 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-207ENST00000612558 EFEMP1Q12805 493 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 MTA1Q13330 715 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 TRIP4Q15650 581 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-207ENST00000612558 LINC01559Q495D7 138 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 ACBD5Q5T8D3 534 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-207ENST00000612558 SNX30Q5VWJ9 437 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 HEATR6Q6AI08 1181 aaKnown RBP9.18□□□□□ -0.94
CCDC47-207ENST00000612558 B4GALNT4Q76KP1 1039 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 HOOK3Q86VS8 718 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 CCDC25Q86WR0 208 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 RELL1Q8IUW5 271 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 TCEAL8Q8IYN2 117 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 ZNF511Q8NB15 262 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 CPT1BQ92523 772 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 PKNOX2Q96KN3 472 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 FCRL2Q96LA5 508 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-207ENST00000612558 MYRFLQ96LU7 910 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 SH3GL2Q99962 352 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 BRD8Q9H0E9 1235 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 SIK2Q9H0K1 926 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 ZBP1Q9H171 429 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 SEMA4AQ9H3S1 761 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 RXFP1Q9HBX9 757 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 MARCH2Q9P0N8 246 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 SNX10Q9Y5X0 201 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 NUP205Q92621 2012 aa9.18□□□□□ -0.94
CCDC47-207ENST00000612558 KIAA1671Q9BY89 1806 aa9.17□□□□□ -0.94
CCDC47-207ENST00000612558 C5orf60A6NFR6 353 aa9.17□□□□□ -0.94
CCDC47-207ENST00000612558 H0YGN5 161 aa9.17□□□□□ -0.94
CCDC47-207ENST00000612558 H3BQF6 201 aa9.17□□□□□ -0.94
CCDC47-207ENST00000612558 PRRG1O14668 218 aa9.17□□□□□ -0.94
CCDC47-207ENST00000612558 TEX28O15482 410 aa9.17□□□□□ -0.94
CCDC47-207ENST00000612558 FGF10O15520 208 aaPredicted RBP9.17□□□□□ -0.94
CCDC47-207ENST00000612558 TLR5O60602 858 aa9.17□□□□□ -0.94
CCDC47-207ENST00000612558 ADH1CP00326 375 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms