RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 GDPD5Q8WTR4 605 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 SCYL1Q96KG9 808 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 ANKRD27Q96NW4 1050 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 MMADHCQ9H3L0 296 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-207ENST00000612273 ASB7Q9H672 318 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 COG4Q9H9E3 785 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 PNPLA8Q9NP80 782 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 SNX15Q9NRS6 342 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 SLC39A10Q9ULF5 831 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 A0A0A0MRY4 1105 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 CAPN8A6NHC0 703 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 ZBTB14O43829 449 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 DDNO94850 711 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-207ENST00000612273 CPOXP36551 454 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 ZNF460Q14592 562 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 HFE2Q6ZVN8 426 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 CELF6Q96J87 481 aaKnown RBP14.42□□□□□ -0.1
COL6A1-207ENST00000612273 SPATA13Q96N96 652 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 RBPJLQ9UBG7 517 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 GJD2Q9UKL4 321 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 CITO14578 2027 aa14.42□□□□□ -0.1
COL6A1-207ENST00000612273 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-207ENST00000612273 FAM72CH0Y354 149 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 STX16-NPEPL1H3BU86 382 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 MT-CO1P00395 513 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 TSHRP16473 764 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 GNL1P36915 607 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-207ENST00000612273 SATB1Q01826 763 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 TNFAIP2Q03169 654 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 FAM72AQ5TYM5 149 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 FAM72DQ6L9T8 149 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 PLPPR4Q7Z2D5 763 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 FAM72BQ86X60 149 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 ZNF567Q8N184 647 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 ARNTL2Q8WYA1 636 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 GATA6Q92908 595 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 NUF2Q9BZD4 464 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 MOCS1Q9NZB8 636 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 COPG2Q9UBF2 871 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 RPL26L1Q9UNX3 145 aaKnown RBP14.41□□□□□ -0.1
COL6A1-207ENST00000612273 FER1L6Q2WGJ9 1857 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 MCM3APO60318 1980 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 TK2O00142 265 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 GLRA3O75311 464 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 BEST1O76090 585 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 OR6B1O95007 311 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 SERPINE1P05121 402 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 ENO3P13929 434 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-207ENST00000612273 ARSAP15289 507 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 ATICP31939 592 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 CCNFP41002 786 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 SERPINB9P50453 376 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 WASHC5Q12768 1159 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 MMEL1Q495T6 779 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 MYLK4Q86YV6 388 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-207ENST00000612273 GALNT4Q8N4A0 578 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 LENG8Q96PV6 779 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-207ENST00000612273 SORT1Q99523 831 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 OMDQ99983 421 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 CDH22Q9UJ99 828 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 SCN1AP35498 2009 aa14.41□□□□□ -0.1
COL6A1-207ENST00000612273 SPTLC1O15269 473 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 GCATO75600 419 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 ATP6V1B1P15313 513 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 PDCD2Q16342 344 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 ZNF772Q68DY9 489 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 PIGZQ86VD9 579 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 CCNYL1Q8N7R7 359 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 OR6Y1Q8NGX8 325 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 MED10Q9BTT4 135 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 SNX25Q9H3E2 840 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 S100A14Q9HCY8 104 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 CHRAC1Q9NRG0 131 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 A0A096LPK6 155 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 H3BRB1 525 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 MPSTP25325 297 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 TKTP29401 623 aaKnown RBP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 MRPS22P82650 360 aaKnown RBP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 LBRQ14739 615 aaKnown RBP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 ARMCX2Q7L311 632 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 DHDDSQ86SQ9 333 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 SLC7A14Q8TBB6 771 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 RNF139Q8WU17 664 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 EDEM1Q92611 657 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 NMD3Q96D46 503 aaKnown RBP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 SH3GL3Q99963 347 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 SLC4A5Q9BY07 1137 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 ATXN3LQ9H3M9 355 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 TUT1Q9H6E5 874 aaKnown RBP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 ITGA11Q9UKX5 1188 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 POMPQ9Y244 141 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 PPME1Q9Y570 386 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 GSTT1P30711 240 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 ABCE1P61221 599 aaKnown RBP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 INCA1Q0VD86 236 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 MED21Q13503 144 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 CCNIQ14094 377 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 TMEM110Q86TL2 294 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms