RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 KLC3Q6P597 504 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 MTHFD1LQ6UB35 978 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 SPATA2LQ8IUW3 424 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-216ENST00000608263 TTC30BQ8N4P2 665 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 PCDH20Q8N6Y1 951 aaKnown RBP10.62□□□□□ -0.71
CTCFL-216ENST00000608263 SHCBP1Q8NEM2 672 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 SLC35B2Q8TB61 432 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 SLCO2A1Q92959 643 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 MRPL46Q9H2W6 279 aaKnown RBP10.62□□□□□ -0.71
CTCFL-216ENST00000608263 PCDH18Q9HCL0 1135 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 PLLPQ9Y342 182 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 CNTNAP2Q9UHC6 1331 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 FZD9O00144 591 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 DPYSL4O14531 572 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 AOC2O75106 756 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 SP100P23497 879 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-216ENST00000608263 GSTT1P30711 240 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 SLC6A3Q01959 620 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 YWHAHQ04917 246 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-216ENST00000608263 CGB2Q6NT52 195 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 ZBTB46Q86UZ6 589 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 FBXL18Q96ME1 805 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 YME1L1Q96TA2 773 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 PRDM12Q9H4Q4 367 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 DHX33Q9H6R0 707 aaKnown RBP10.62□□□□□ -0.71
CTCFL-216ENST00000608263 ZNF212Q9UDV6 495 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 NHSL1Q5SYE7 1610 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 ITGB4P16144 1822 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 TSPAN8P19075 237 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 NEK3P51956 506 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 PTP4A2Q12974 167 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 NOMO1Q15155 1222 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 OASLQ15646 514 aaKnown RBP10.62□□□□□ -0.71
CTCFL-216ENST00000608263 BTBD8Q5XKL5 378 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 PGLYRP2Q96PD5 576 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 PRPF18Q99633 342 aaKnown RBP10.62□□□□□ -0.71
CTCFL-216ENST00000608263 EBNA1BP2Q99848 306 aaKnown RBP10.62□□□□□ -0.71
CTCFL-216ENST00000608263 FRMD8P1Q9BZ68 369 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-216ENST00000608263 PIF1Q9H611 641 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 NENFQ9UMX5 172 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 CDYLQ9Y232 598 aa10.62□□□□□ -0.71
CTCFL-216ENST00000608263 CHADO15335 359 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 CCDC15Q0P6D6 951 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 DYNC1I2Q13409 638 aaKnown RBP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 PDAP1Q13442 181 aaKnown RBP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 MFSD10Q14728 455 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 STILQ15468 1287 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 PMF1Q6P1K2 205 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 CDHR3Q6ZTQ4 885 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 ARHGAP18Q8N392 663 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 CCT7Q99832 543 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 SYT15Q9BQS2 421 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 MRPL1Q9BYD6 325 aaKnown RBP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 FRMD8Q9BZ67 464 aaPredicted RBP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 FAM8A1Q9UBU6 413 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 VANGL2Q9ULK5 521 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 PCDHB7Q9Y5E2 793 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 MAFO75444 373 aaPredicted RBP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 SMNDC1O75940 238 aaKnown RBP eCLIP10.61□□□□□ -0.713e-6■■■□□ 16.8
CTCFL-216ENST00000608263 PIGNO95427 931 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 METTL18O95568 372 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 IRF1P10914 325 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 ETFBP38117 255 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 CSHL1Q14406 222 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 SEL1L3Q68CR1 1132 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 ITPRIPL1Q6GPH6 555 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 MIB1Q86YT6 1006 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 NAT8LQ8N9F0 302 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 PPP2R3CQ969Q6 453 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 EPAS1Q99814 870 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 TMEM134Q9H6X4 195 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 TMEM39AQ9NV64 488 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 ANKRD12Q6UB98 2062 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 CLDN5O00501 218 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 FKBP6O75344 327 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 FARP2O94887 1054 aaPredicted RBP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 CLPTM1O96005 669 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 GP5P40197 560 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 OLIG2Q13516 323 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 GALNTL6Q49A17 601 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 LBX2Q6XYB7 198 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 BNC2Q6ZN30 1099 aaPredicted RBP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 SLC4A11Q8NBS3 891 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 CLEC4CQ8WTT0 213 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 DCAKDQ8WVC6 231 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 SLC7A6OSQ96CW6 309 aaPredicted RBP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 PIWIL1Q96J94 861 aaKnown RBP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 MRPL45Q9BRJ2 306 aaKnown RBP10.61□□□□□ -0.71
CTCFL-216ENST00000608263 GRIP2Q9C0E4 1043 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 LRRC40Q9H9A6 602 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 GOLGA2P5Q9HBQ8 144 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 SYNPO2Q9UMS6 1093 aa10.61□□□□□ -0.71
CTCFL-216ENST00000608263 E7ENQ6 273 aa10.6□□□□□ -0.71
CTCFL-216ENST00000608263 SCAMP3O14828 347 aaKnown RBP10.6□□□□□ -0.71
CTCFL-216ENST00000608263 SUPT7LO94864 414 aa10.6□□□□□ -0.71
CTCFL-216ENST00000608263 VAPBO95292 243 aa10.6□□□□□ -0.71
CTCFL-216ENST00000608263 BPGMP07738 259 aa10.6□□□□□ -0.71
CTCFL-216ENST00000608263 MAP2K5Q13163 448 aa10.6□□□□□ -0.71
CTCFL-216ENST00000608263 VEPH1Q14D04 833 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms