RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 ADGRG5Q8IZF4 528 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 CFAP52Q8N1V2 620 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 SAMD3Q8N6K7 520 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 PDPRQ8NCN5 879 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 B3GALNT2Q8NCR0 500 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 TMIEQ8NEW7 156 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 APBB2Q92870 758 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 MRPL38Q96DV4 380 aaKnown RBP4.48□□□□□ -1.69
LINC00343-210ENST00000608220 TEKT5Q96M29 485 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 TTC14Q96N46 770 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 UROC1Q96N76 676 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 IWS1Q96ST2 819 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 VRK1Q99986 396 aaPredicted RBP4.48□□□□□ -1.69
LINC00343-210ENST00000608220 FSD1Q9BTV5 496 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 LMAN2LQ9H0V9 348 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 RNF41Q9H4P4 317 aaPredicted RBP4.48□□□□□ -1.69
LINC00343-210ENST00000608220 MAN1C1Q9NR34 630 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 TCP11L1Q9NUJ3 509 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 TRMT13Q9NUP7 481 aaKnown RBP4.48□□□□□ -1.69
LINC00343-210ENST00000608220 DDX56Q9NY93 547 aaKnown RBP4.48□□□□□ -1.69
LINC00343-210ENST00000608220 MAP3K20Q9NYL2 800 aaKnown RBP4.48□□□□□ -1.69
LINC00343-210ENST00000608220 VSX1Q9NZR4 365 aaPredicted RBP4.48□□□□□ -1.69
LINC00343-210ENST00000608220 CTTNBP2NLQ9P2B4 639 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 FRMD4BQ9Y2L6 1034 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.48□□□□□ -1.69
LINC00343-210ENST00000608220 PCDHGA9Q9Y5G4 932 aaKnown RBP4.48□□□□□ -1.69
LINC00343-210ENST00000608220 PCDHGA8Q9Y5G5 932 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 PCDHGA7Q9Y5G6 932 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 PCDHGA6Q9Y5G7 932 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 PCDHGA3Q9Y5H0 932 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 PTPRSQ13332 1948 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 MICAL3Q7RTP6 2002 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 REV3LO60673 3130 aa4.48□□□□□ -1.69
LINC00343-210ENST00000608220 ABCB11O95342 1321 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 PIEZO1Q92508 2521 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 KIAA1217Q5T5P2 1943 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.47□□□□□ -1.69
LINC00343-210ENST00000608220 RANBP6O60518 1105 aaKnown RBP4.47□□□□□ -1.69
LINC00343-210ENST00000608220 PEX14O75381 377 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 PRDM1O75626 825 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 SUN1O94901 812 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 MYOGP15173 224 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 GPD1P21695 349 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 CALML3P27482 149 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 SMARCA1P28370 1054 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 GRIA3P42263 894 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 RPS6P62753 249 aaKnown RBP4.47□□□□□ -1.69
LINC00343-210ENST00000608220 KRT85P78386 507 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 TLE1Q04724 770 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 MTMR1Q13613 665 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 ALX1Q15699 326 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 STXBP2Q15833 593 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 ASPRV1Q53RT3 343 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 SLC30A10Q6XR72 485 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 PPTC7Q8NI37 304 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 MYCBPAPQ8TBZ2 947 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 NSUN6Q8TEA1 469 aaKnown RBP4.47□□□□□ -1.69
LINC00343-210ENST00000608220 GDPD5Q8WTR4 605 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 PABPC5Q96DU9 382 aaKnown RBP4.47□□□□□ -1.69
LINC00343-210ENST00000608220 PGBD1Q96JS3 809 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 MRGPRX4Q96LA9 322 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 TRIB1Q96RU8 372 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 SMOQ99835 787 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 EPHX3Q9H6B9 360 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 SLAMF7Q9NQ25 335 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 PDGFCQ9NRA1 345 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 CALCOCO1Q9P1Z2 691 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 ST3GAL5Q9UNP4 418 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 MRPL11Q9Y3B7 192 aaKnown RBP4.47□□□□□ -1.69
LINC00343-210ENST00000608220 PCDHB1Q9Y5F3 818 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 PRRC2BQ5JSZ5 2229 aaKnown RBP4.47□□□□□ -1.69
LINC00343-210ENST00000608220 NLRC5Q86WI3 1866 aa4.47□□□□□ -1.69
LINC00343-210ENST00000608220 ARHGEF17Q96PE2 2063 aaPredicted RBP4.47□□□□□ -1.69
LINC00343-210ENST00000608220 CCDC194A0A1B0GVG4 234 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 LINC01553A4QN01 128 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 EPOPA6NHQ4 379 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 KATNA1O75449 491 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 RBMXL2O75526 392 aaKnown RBP4.46□□□□□ -1.7
LINC00343-210ENST00000608220 STAM2O75886 525 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 RB1P06400 928 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 SNHG28P0DPA3 235 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 TGFB3P10600 412 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 PDHBP11177 359 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 PPP3CBP16298 524 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 KCNA5P22460 613 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 CCND1P24385 295 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 ABCG1P45844 678 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 PSMC1P62191 440 aaKnown RBP4.46□□□□□ -1.7
LINC00343-210ENST00000608220 HTRA4P83105 476 aaPredicted RBP4.46□□□□□ -1.7
LINC00343-210ENST00000608220 EXOSC10Q01780 885 aaKnown RBP4.46□□□□□ -1.7
LINC00343-210ENST00000608220 NHLH1Q02575 133 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 ZNF543Q08ER8 600 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 KHDC1Q4VXA5 237 aaKnown RBP4.46□□□□□ -1.7
LINC00343-210ENST00000608220 KIAA0895LQ68EN5 471 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 MICALCLQ6ZW33 695 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 TTC7BQ86TV6 843 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 IQCA1Q86XH1 822 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 ADHFE1Q8IWW8 467 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 NEK9Q8TD19 979 aa4.46□□□□□ -1.7
LINC00343-210ENST00000608220 SEPT8Q92599 483 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms