RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 SERPINB6P35237 376 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 FNTAP49354 379 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 GBE1Q04446 702 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 USP4Q13107 963 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 SNX1Q13596 522 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 PAFAH1B3Q15102 231 aaKnown RBP15.1■□□□□ 0.01
VRK3-212ENST00000596814 NOMO1Q15155 1222 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 ATAT1Q5SQI0 421 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 RFWD3Q6PCD5 774 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 POTEHQ6S545 545 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 RIPOR3Q96MK2 946 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 MPP6Q9NZW5 540 aa15.1■□□□□ 0.01
VRK3-212ENST00000596814 TCF3P15923 654 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 WEE1P30291 646 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 LTBRP36941 435 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 COILP38432 576 aaPredicted RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 NR2C2P49116 596 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 ZNF77Q15935 545 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 RABGAP1LQ5R372 815 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 C8orf74Q6P047 294 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 TTC27Q6P3X3 843 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 CCDC137Q6PK04 289 aaKnown RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 ARID3BQ8IVW6 561 aaPredicted RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 RTL3Q8N8U3 475 aaKnown RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 MYRIPQ8NFW9 859 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 FGF13Q92913 245 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 IGSF8Q969P0 613 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 MSLNLQ96KJ4 702 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 RUNDC3BQ96NL0 473 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 KIF9Q9HAQ2 790 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 DNPEPQ9ULA0 475 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 REV3LO60673 3130 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 E2F8A0AVK6 867 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 DRGXA6NNA5 263 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 WASH4PA8MWX3 477 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 MAP3K6O95382 1288 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 RHOQP17081 205 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 IRAK1P51617 712 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 VCPP55072 806 aaKnown RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 EIF3EP60228 445 aaKnown RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 TUBB4BP68371 445 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 BYSLQ13895 437 aaKnown RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 C5orf22Q49AR2 442 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 CCDC70Q6NSX1 233 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 DRICH1Q6PGQ1 229 aaPredicted RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 BZW1Q7L1Q6 419 aaKnown RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 BBS7Q8IWZ6 715 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 FAM217AQ8IXS0 508 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 CCDC105Q8IYK2 499 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 NPWQ8N729 165 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 RIN3Q8TB24 985 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 SLC35B2Q8TB61 432 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 NKD2Q969F2 451 aaPredicted RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 MYEOVQ96EZ4 313 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 CCDC114Q96M63 670 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 PRICKLE1Q96MT3 831 aaPredicted RBP15.09■□□□□ 0.01
VRK3-212ENST00000596814 TMEM248Q9NWD8 314 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 DONSONQ9NYP3 566 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 GDE1Q9NZC3 331 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 DTLQ9NZJ0 730 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 AMACRQ9UHK6 382 aa15.09■□□□□ 0.01
VRK3-212ENST00000596814 BRWD1Q9NSI6 2320 aa15.08■□□□□ 0
VRK3-212ENST00000596814 SZT2Q5T011 3432 aa15.08■□□□□ 0
VRK3-212ENST00000596814 TRDMT1O14717 391 aaKnown RBP15.08■□□□□ 0
VRK3-212ENST00000596814 CNTN5O94779 1100 aa15.08■□□□□ 0
VRK3-212ENST00000596814 MTHFRP42898 656 aa15.08■□□□□ 0
VRK3-212ENST00000596814 KCNJ1P48048 391 aa15.08■□□□□ 0
VRK3-212ENST00000596814 SLC10A2Q12908 348 aaPredicted RBP15.08■□□□□ 0
VRK3-212ENST00000596814 DHX34Q14147 1143 aaKnown RBP15.08■□□□□ 0
VRK3-212ENST00000596814 ALFQ53S48 1182 aa15.08■□□□□ 0
VRK3-212ENST00000596814 TFAP2DQ7Z6R9 452 aa15.08■□□□□ 0
VRK3-212ENST00000596814 NLRP14Q86W24 1093 aa15.08■□□□□ 0
VRK3-212ENST00000596814 CIR1Q86X95 450 aaPredicted RBP15.08■□□□□ 0
VRK3-212ENST00000596814 CELF5Q8N6W0 485 aaKnown RBP15.08■□□□□ 0
VRK3-212ENST00000596814 DOCK8Q8NF50 2099 aa15.08■□□□□ 0
VRK3-212ENST00000596814 CCDC26Q8TAB7 109 aa15.08■□□□□ 0
VRK3-212ENST00000596814 UBXN4Q92575 508 aa15.08■□□□□ 0
VRK3-212ENST00000596814 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.08■□□□□ 0
VRK3-212ENST00000596814 PCYOX1Q9UHG3 505 aa15.08■□□□□ 0
VRK3-212ENST00000596814 RAD54BQ9Y620 910 aa15.08■□□□□ 0
VRK3-212ENST00000596814 V9GYY5 206 aaPredicted RBP15.08■□□□□ 0
VRK3-212ENST00000596814 TYW5A2RUC4 315 aaKnown RBP15.07■□□□□ 0
VRK3-212ENST00000596814 RAD51CO43502 376 aa15.07■□□□□ 0
VRK3-212ENST00000596814 TSPAN3O60637 253 aa15.07■□□□□ 0
VRK3-212ENST00000596814 RBP3P10745 1247 aa15.07■□□□□ 0
VRK3-212ENST00000596814 DR1Q01658 176 aa15.07■□□□□ 0
VRK3-212ENST00000596814 OASLQ15646 514 aaKnown RBP15.07■□□□□ 0
VRK3-212ENST00000596814 TTC39BQ5VTQ0 682 aaPredicted RBP15.07■□□□□ 0
VRK3-212ENST00000596814 GPR153Q6NV75 609 aa15.07■□□□□ 0
VRK3-212ENST00000596814 ZC3H18Q86VM9 953 aaKnown RBP15.07■□□□□ 0
VRK3-212ENST00000596814 CFAP52Q8N1V2 620 aa15.07■□□□□ 0
VRK3-212ENST00000596814 CPXM2Q8N436 756 aa15.07■□□□□ 0
VRK3-212ENST00000596814 LZTR1Q8N653 840 aa15.07■□□□□ 0
VRK3-212ENST00000596814 SMRP1Q8NCR6 262 aa15.07■□□□□ 0
VRK3-212ENST00000596814 GRK7Q8WTQ7 553 aa15.07■□□□□ 0
VRK3-212ENST00000596814 MYLIPQ8WY64 445 aa15.07■□□□□ 0
VRK3-212ENST00000596814 SMARCD2Q92925 531 aa15.07■□□□□ 0
VRK3-212ENST00000596814 ASB16Q96NS5 453 aa15.07■□□□□ 0
VRK3-212ENST00000596814 OLFM3Q96PB7 478 aa15.07■□□□□ 0
VRK3-212ENST00000596814 CDH7Q9ULB5 785 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms