RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 NAXDQ8IW45 347 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 ATP6V0D2Q8N8Y2 350 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 KDF1Q8NAX2 398 aaPredicted RBP13.75□□□□□ -0.21
APOC1-209ENST00000592885 MLKLQ8NB16 471 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 C1orf216Q8TAB5 229 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 SHC3Q92529 594 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 MYO19Q96H55 970 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 NOX5Q96PH1 765 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 SCNM1Q9BWG6 230 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 NUCKS1Q9H1E3 243 aaKnown RBP13.75□□□□□ -0.21
APOC1-209ENST00000592885 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.75□□□□□ -0.213e-11■■■□□ 18.3
APOC1-209ENST00000592885 STIM2Q9P246 746 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 SLC12A6Q9UHW9 1150 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 EIF2B4Q9UI10 523 aaKnown RBP13.75□□□□□ -0.21
APOC1-209ENST00000592885 CYTH4Q9UIA0 394 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 PCDHGC3Q9UN70 934 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.75□□□□□ -0.21
APOC1-209ENST00000592885 PCDHGB2Q9Y5G2 931 aa13.75□□□□□ -0.21
APOC1-209ENST00000592885 SPAARA0A1B0GVQ0 90 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 TARSL2A2RTX5 802 aaKnown RBP13.74□□□□□ -0.21
APOC1-209ENST00000592885 FAM221BA6H8Z2 402 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 TRUB2O95900 331 aaKnown RBP13.74□□□□□ -0.21
APOC1-209ENST00000592885 MOCS2O96007 188 aaPredicted RBP13.74□□□□□ -0.21
APOC1-209ENST00000592885 TACR2P21452 398 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 ACSL1P33121 698 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 GRIA4P48058 902 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 OXCT1P55809 520 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 SNX16P57768 344 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 RPS24P62847 133 aaKnown RBP13.74□□□□□ -0.21
APOC1-209ENST00000592885 EIF4EBP2Q13542 120 aaPredicted RBP13.74□□□□□ -0.21
APOC1-209ENST00000592885 TEAD4Q15561 434 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 DCAF6Q58WW2 860 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 PITRM1Q5JRX3 1037 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 SYPL2Q5VXT5 272 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 FAM124AQ86V42 546 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 CHSY1Q86X52 802 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 FAM114A1Q8IWE2 563 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 CARNMT1Q8N4J0 409 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 ZNF366Q8N895 744 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 OR2I1PQ8NGU4 316 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 GATA6Q92908 595 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 MRGPRX3Q96LB0 322 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 SLC2A13Q96QE2 648 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 PABPC3Q9H361 631 aaKnown RBP13.74□□□□□ -0.21
APOC1-209ENST00000592885 C6orf106Q9H6K1 298 aaPredicted RBP13.74□□□□□ -0.21
APOC1-209ENST00000592885 KIAA1522Q9P206 1035 aaPredicted RBP13.74□□□□□ -0.21
APOC1-209ENST00000592885 INTS6Q9UL03 887 aaKnown RBP13.74□□□□□ -0.21
APOC1-209ENST00000592885 TPX2Q9ULW0 747 aaKnown RBP13.74□□□□□ -0.21
APOC1-209ENST00000592885 NCKAP1Q9Y2A7 1128 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 MSRB2Q9Y3D2 182 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 PCDHB9Q9Y5E1 797 aa13.74□□□□□ -0.21
APOC1-209ENST00000592885 EDDM13A0A1B0GTR0 161 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 BECN2A8MW95 431 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 C1QTNF9BB2RNN3 333 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 F5H5T6 163 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 HYAL3O43820 417 aaPredicted RBP13.73□□□□□ -0.21
APOC1-209ENST00000592885 SH3BP5O60239 455 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 HSF2BPO75031 334 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 C1QTNF9P0C862 333 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 CD27P26842 260 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 CCR1P32246 355 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 CDK17Q00537 523 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 TRIP6Q15654 476 aaKnown RBP13.73□□□□□ -0.21
APOC1-209ENST00000592885 ZC3H12AQ5D1E8 599 aaKnown RBP13.73□□□□□ -0.21
APOC1-209ENST00000592885 EFHC1Q5JVL4 640 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 RABGAP1LQ5R372 815 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 RAP1GAP2Q684P5 730 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 GLRX5Q86SX6 157 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 LGI2Q8N0V4 545 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 ADAM32Q8TC27 787 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 SNX19Q92543 992 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 MYEOVQ96EZ4 313 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 CRACR2AQ9BSW2 395 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 GAREM1Q9H706 876 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 FAM204AQ9H8W3 233 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 TMEM51Q9NW97 253 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 FZD4Q9ULV1 537 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 ERVW-1Q9UQF0 538 aa13.73□□□□□ -0.21
APOC1-209ENST00000592885 A0A1B0GVM2 712 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 TCAF2A6NFQ2 919 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 KCNU1A8MYU2 1149 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 FLRT2O43155 660 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 SIN3BO75182 1162 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 SLC9A1P19634 815 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 ABCB4P21439 1286 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 PON1P27169 355 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 MTIF2P46199 727 aaKnown RBP13.72□□□□□ -0.21
APOC1-209ENST00000592885 ECT2LQ008S8 904 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 PTK2Q05397 1052 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 SULT2A1Q06520 285 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 CAMK4Q16566 473 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 MAN2A1Q16706 1144 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
APOC1-209ENST00000592885 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 RNF219Q5W0B1 726 aaPredicted RBP13.72□□□□□ -0.21
APOC1-209ENST00000592885 GJB7Q6PEY0 223 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 C11orf57Q6ZUT1 292 aaPredicted RBP13.72□□□□□ -0.21
APOC1-209ENST00000592885 RAB44Q7Z6P3 723 aaPredicted RBP13.72□□□□□ -0.21
APOC1-209ENST00000592885 PPP1R13BQ96KQ4 1090 aa13.72□□□□□ -0.21
APOC1-209ENST00000592885 PPP1R9BQ96SB3 815 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms