RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 TENM4Q6N022 2769 aa20.4■□□□□ 0.86
PRKCSH-216ENST00000592445 YJEFN3A6XGL0 299 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 E7ENQ6 273 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 XPO1O14980 1071 aaKnown RBP20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 ACTN2P35609 894 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 SLC11A2P49281 568 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 CXADRP78310 365 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 CCDC173Q0VFZ6 552 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 ILKQ13418 452 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 KCNJ12Q14500 433 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 HNRNPA1L2Q32P51 320 aaKnown RBP20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 PIK3R6Q5UE93 754 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 KRT39Q6A163 491 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 MFN1Q8IWA4 741 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 TATDN2Q93075 761 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 ABCC13Q9NSE7 274 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 FZD4Q9ULV1 537 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 ZNF462Q96JM2 2506 aa20.39■□□□□ 0.85
PRKCSH-216ENST00000592445 PTPRQQ9UMZ3 2332 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 TP53BP1Q12888 1972 aaPredicted RBP20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 GOLGA6L7A0A1B0GV03 622 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 A0A1W2PR77 199 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 TLR4O00206 839 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 WNT9AO14904 365 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 ASLP04424 464 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 GLDCP23378 1020 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 SLC8A1P32418 973 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 CSKP41240 450 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 CCR5P51681 352 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 CFHR1Q03591 330 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 BNIP3Q12983 259 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 SEMA4DQ92854 862 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 TTC17Q96AE7 1141 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 MYO19Q96H55 970 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 FAXDC2Q96IV6 333 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 HESX1Q9UBX0 185 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 TSPAN16Q9UKR8 245 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 CLCA2Q9UQC9 943 aa20.38■□□□□ 0.85
PRKCSH-216ENST00000592445 TYW5A2RUC4 315 aaKnown RBP20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 IRAK2O43187 625 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 CKMT2P17540 419 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 RPL13P26373 211 aaKnown RBP20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 GTF2H1P32780 548 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 PSMC2P35998 433 aaKnown RBP20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 PSMD8P48556 350 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 NXPH1P58417 271 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 TLE3Q04726 772 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 ENPEPQ07075 957 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 C9orf64Q5T6V5 341 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 NUGGCQ68CJ6 796 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 CCDC117Q8IWD4 279 aaPredicted RBP20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 UNC45BQ8IWX7 931 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 OXR1Q8N573 874 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 OR14C36Q8NHC7 312 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 FIBINQ8TAL6 211 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 IRX2Q9BZI1 471 aaPredicted RBP20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 ADAMTS1Q9UHI8 967 aa20.37■□□□□ 0.85
PRKCSH-216ENST00000592445 CAPN8A6NHC0 703 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 ACTN4O43707 911 aaKnown RBP20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 LCP1P13796 627 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 SLC6A4P31645 630 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 BST2Q10589 180 aaKnown RBP20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 NFIL3Q16649 462 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 SGO2Q562F6 1265 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 FAM133BQ5BKY9 247 aaKnown RBP20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 SND1Q7KZF4 910 aaKnown RBP eCLIP20.36■□□□□ 0.859e-13■■■■■ 31.9
PRKCSH-216ENST00000592445 SPACA3Q8IXA5 215 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 CARNMT1Q8N4J0 409 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 HJURPQ8NCD3 748 aaPredicted RBP20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 FBXL13Q8NEE6 735 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 UBA3Q8TBC4 463 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 MRGPRX3Q96LB0 322 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 ERVMER34-1Q9H9K5 563 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 RAB20Q9NX57 234 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 TPX2Q9ULW0 747 aaKnown RBP20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 CEP83Q9Y592 693 aa20.36■□□□□ 0.85
PRKCSH-216ENST00000592445 MGAQ8IWI9 3026 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D3DA0A087WVF3 549 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D3IA0A087WXS9 549 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D3EA0A087X179 549 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D3KA0A087X1G2 549 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TARSL2A2RTX5 802 aaKnown RBP20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D3FA6NER0 549 aaPredicted RBP20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D3LB9A6J9 549 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 J3QKU1 62 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 ACSL4O60488 711 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D3HP0C7X1 549 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 CD19P15391 556 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 GOT1P17174 413 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 RXRGP48443 463 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 MXI1P50539 228 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 ADPRHP54922 357 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 ADAM9Q13443 819 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 CDH18Q13634 790 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D25Q3MII6 688 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TAF1BQ53T94 588 aaPredicted RBP20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 SFMBT2Q5VUG0 894 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D3GQ6DHY5 549 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D3CQ6IPX1 549 aa20.35■□□□□ 0.85
PRKCSH-216ENST00000592445 TBC1D3Q8IZP1 549 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms