RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 UBE2UQ5VVX9 321 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 IDO2Q6ZQW0 420 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 PSD4Q8NDX1 1056 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 ZNF75CPQ92670 426 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 SLC29A1Q99808 456 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 FAM213AQ9BRX8 229 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 HERPUD2Q9BSE4 406 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 TRIT1Q9H3H1 467 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 GIMAP4Q9NUV9 329 aa12.55□□□□□ -0.4
SMARCA4-217ENST00000591595 KLRG2A4D1S0 409 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 ENTPD3O75355 529 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 ALOX5P09917 674 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 PTK6Q13882 451 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 TCEAL1Q15170 157 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 ZNF568Q3ZCX4 644 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 WDR44Q5JSH3 913 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 DENND1AQ8TEH3 1009 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 JDP2Q8WYK2 163 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 C7orf26Q96N11 449 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 TDRD1Q9BXT4 1180 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 TBX20Q9UMR3 447 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 FADS2P1A8MWK0 482 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 PI4K2BG5E9Z4 385 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 FCHO1O14526 889 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 POLR1CO15160 346 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 IFNB1P01574 187 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 PCNAP12004 261 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 KRT10P13645 584 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 ADSSP30520 456 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 GNA12Q03113 381 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 DSC3Q14574 896 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 PPP4R4Q6NUP7 873 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 ZBTB46Q86UZ6 589 aa12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 ZNF717Q9BY31 904 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-217ENST00000591595 PABPN1LA6NDY0 278 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 ARHGAP42A6NI28 874 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 ATE1O95260 518 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 MMP10P09238 476 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 PIK3CAP42336 1068 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 MAGEA4P43358 317 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 LIN9Q5TKA1 542 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 SYDE1Q6ZW31 735 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 EEPD1Q7L9B9 569 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 IGFN1Q86VF2 1251 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 IFNL1Q8IU54 200 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 C12orf56Q8IXR9 622 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 SEPT12Q8IYM1 358 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 MCOLN2Q8IZK6 566 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 C4orf33Q8N1A6 199 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 SMARCAD1Q9H4L7 1026 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 DCAF16Q9NXF7 216 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 GDAP2Q9NXN4 497 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 ZNF701M0R085 212 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 MSI1O43347 362 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 FGFR1P11362 822 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 CA4P22748 312 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 NPTX2P47972 431 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 KDSRQ06136 332 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 STAT4Q14765 748 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 UGCGQ16739 394 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 ATAD3BQ5T9A4 648 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 RHBDF2Q6PJF5 856 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 ZNF512Q96ME7 567 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 UROC1Q96N76 676 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 ALPK1Q96QP1 1244 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 CDK5RAP1Q96SZ6 601 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 GLIS2Q9BZE0 524 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 SNTG2Q9NY99 539 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 IL20Q9NYY1 176 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 ARHGAP26Q9UNA1 814 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 MTO1Q9Y2Z2 717 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 hCG_2039718K7EN88 272 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 GIPC1O14908 333 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 GRK2P25098 689 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 CLK1P49759 484 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 STX1BP61266 288 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 C19orf57Q0VDD7 668 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 HIC1Q14526 733 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 DGKDQ16760 1214 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 TKFCQ3LXA3 575 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 C6orf52Q5T4I8 152 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 SETD3Q86TU7 594 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 RHOT1Q8IXI2 618 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 NLGN1Q8N2Q7 840 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 HIPK4Q8NE63 616 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 SLC7A3Q8WY07 619 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 OMA1Q96E52 524 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 CEP170P1Q96L14 293 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 TMEM120AQ9BXJ8 343 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 WASH6PQ9NQA3 447 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 FARSBQ9NSD9 589 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 COL20A1Q9P218 1284 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 CDC14AQ9UNH5 594 aa12.53□□□□□ -0.4
SMARCA4-217ENST00000591595 A0A1W2PPW3 197 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 INO80B-WBP1J3KQ70 363 aa12.52□□□□□ -0.4
SMARCA4-217ENST00000591595 TK2O00142 265 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms