RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 BBS2Q9BXC9 721 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 SLC2A11Q9BYW1 496 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 PCDH18Q9HCL0 1135 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 ZNF212Q9UDV6 495 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.44□□□□□ -0.42
APOC1-206ENST00000590334 A0A0C4DFX4 3053 aa12.44□□□□□ -0.42
APOC1-206ENST00000590334 NYNRINQ9P2P1 1898 aaKnown RBP12.43□□□□□ -0.42
APOC1-206ENST00000590334 A0A1B0GVM2 712 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 TYW5A2RUC4 315 aaKnown RBP12.43□□□□□ -0.42
APOC1-206ENST00000590334 TCAF2A6NFQ2 919 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 WASH4PA8MWX3 477 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 NEDD8-MDP1E9PL57 170 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 TBL1XO60907 577 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 SRGAP2O75044 1071 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 CLDN11O75508 207 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 FTCDO95954 541 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 RHOQP17081 205 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 KDELR1P24390 212 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 IL4RP24394 825 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 GJA4P35212 333 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 EIF2DP41214 584 aaKnown RBP12.43□□□□□ -0.42
APOC1-206ENST00000590334 IRAK1P51617 712 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 CDH4P55283 916 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 RPS24P62847 133 aaKnown RBP12.43□□□□□ -0.42
APOC1-206ENST00000590334 DPYSL3Q14195 570 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 TAZQ16635 292 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 ANO4Q32M45 955 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 NLRP14Q86W24 1093 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 MAP7D3Q8IWC1 876 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 CFAP52Q8N1V2 620 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 KCTD6Q8NC69 237 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 EXD1Q8NHP7 514 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 DDI1Q8WTU0 396 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 KRT35Q92764 455 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 FAF2Q96CS3 445 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 NECAB3Q96P71 396 aaPredicted RBP12.43□□□□□ -0.42
APOC1-206ENST00000590334 ZNF670Q9BS34 389 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 ZYG11BQ9C0D3 744 aa12.43□□□□□ -0.42
APOC1-206ENST00000590334 C8orf33Q9H7E9 229 aaPredicted RBP12.43□□□□□ -0.42
APOC1-206ENST00000590334 CWC15Q9P013 229 aaKnown RBP12.43□□□□□ -0.42
APOC1-206ENST00000590334 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 H3BRJ5 948 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 EEF2KO00418 725 aaKnown RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 FGF10O15520 208 aaPredicted RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 DDX3YO15523 660 aaKnown RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 CREB3O43889 395 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 KIF5CO60282 957 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 CNTN5O94779 1100 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 LUC7L3O95232 432 aaKnown RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 CD48P09326 243 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 GOT1P17174 413 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 MSNP26038 577 aaKnown RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 GJC1P36383 396 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 ARL4AP40617 200 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 MARCKSL1P49006 195 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 CDH6P55285 790 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 TPI1P60174 286 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 AMPD2Q01433 879 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 DPYSQ14117 519 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 ALFQ53S48 1182 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 PPP6R3Q5H9R7 873 aaPredicted RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 RFX8Q6ZV50 586 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 KIAA0907Q7Z7F0 614 aaPredicted RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 RALGPS2Q86X27 583 aaPredicted RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 RCOR2Q8IZ40 523 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 UBL4BQ8N7F7 174 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 ZNF557Q8N988 423 aaPredicted RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 FIBINQ8TAL6 211 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 RAPGEF5Q92565 580 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 ALG3Q92685 438 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 CSPG4P5Q96PW8 444 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 XPO6Q96QU8 1125 aaKnown RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 UHRF1Q96T88 793 aaPredicted RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 TMEM248Q9NWD8 314 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 WNT16Q9UBV4 365 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 TBC1D30Q9Y2I9 924 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 JRKLQ9Y4A0 524 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 MUC22E2RYF6 1773 aaPredicted RBP12.42□□□□□ -0.42
APOC1-206ENST00000590334 MUC3AQ02505 3323 aa12.42□□□□□ -0.42
APOC1-206ENST00000590334 SHISA7A6NL88 538 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 SPECC1L-ADORA2AF8WAN1 911 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 ZRANB2O95218 330 aaKnown RBP eCLIP12.41□□□□□ -0.42
APOC1-206ENST00000590334 KRT1P04264 644 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 CISD3P0C7P0 127 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 EPHB2P29323 1055 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 CTHP32929 405 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 OPRD1P41143 372 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 RWDD2BP57060 319 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 COPS2P61201 443 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 PRKCQQ04759 706 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 KRT81Q14533 505 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 SLC44A4Q53GD3 710 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 ANKRD20A8PQ5CZ79 823 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 ZNF569Q5MCW4 686 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 IER5LQ5T953 404 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 CXorf57Q6NSI4 855 aaKnown RBP12.41□□□□□ -0.42
APOC1-206ENST00000590334 C1orf228Q6PIY5 440 aa12.41□□□□□ -0.42
APOC1-206ENST00000590334 SETD3Q86TU7 594 aaPredicted RBP12.41□□□□□ -0.42
APOC1-206ENST00000590334 C12orf40Q86WS4 652 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms