RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 FAM129BQ96TA1 746 aa15.69■□□□□ 0.1
SF3A2-204ENST00000589118 OMDQ99983 421 aa15.69■□□□□ 0.1
SF3A2-204ENST00000589118 ZSCAN16Q9H4T2 348 aaPredicted RBP15.69■□□□□ 0.1
SF3A2-204ENST00000589118 GDF3Q9NR23 364 aa15.69■□□□□ 0.1
SF3A2-204ENST00000589118 SLCO3A1Q9UIG8 710 aa15.69■□□□□ 0.1
SF3A2-204ENST00000589118 PCDHA7Q9UN72 937 aa15.69■□□□□ 0.1
SF3A2-204ENST00000589118 CA5BQ9Y2D0 317 aa15.69■□□□□ 0.1
SF3A2-204ENST00000589118 J3QKU1 62 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 TLR4O00206 839 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 ATP5BP06576 529 aaKnown RBP15.68■□□□□ 0.1
SF3A2-204ENST00000589118 LCP1P13796 627 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 MAT2AP31153 395 aaKnown RBP15.68■□□□□ 0.1
SF3A2-204ENST00000589118 SLC8A1P32418 973 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 CSKP41240 450 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 PSMD8P48556 350 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 NXPH1P58417 271 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 KCNH2Q12809 1159 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 LY6DQ14210 128 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 E2F5Q15329 346 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 FAM133BQ5BKY9 247 aaKnown RBP15.68■□□□□ 0.1
SF3A2-204ENST00000589118 PIK3R6Q5UE93 754 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 NADSYN1Q6IA69 706 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 CFAP52Q8N1V2 620 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 ANKRD52Q8NB46 1076 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 RNF139Q8WU17 664 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 BAP1Q92560 729 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 SNX21Q969T3 373 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 PAGE5Q96GU1 130 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 IMPG2Q9BZV3 1241 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 EXOC1Q9NV70 894 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 STOML2Q9UJZ1 356 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 FRMD4BQ9Y2L6 1034 aa15.68■□□□□ 0.1
SF3A2-204ENST00000589118 HBS1LQ9Y450 684 aaKnown RBP15.68■□□□□ 0.1
SF3A2-204ENST00000589118 MAST4O15021 2626 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 MYO18BQ8IUG5 2567 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 TRIM38O00635 465 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 CALCAP01258 141 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 C1SP09871 688 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 VAV1P15498 845 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 RPS24P62847 133 aaKnown RBP15.67■□□□□ 0.1
SF3A2-204ENST00000589118 HNRNPA1L2Q32P51 320 aaKnown RBP15.67■□□□□ 0.1
SF3A2-204ENST00000589118 TAF1BQ53T94 588 aaPredicted RBP15.67■□□□□ 0.1
SF3A2-204ENST00000589118 ARHGAP40Q5TG30 622 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 ARHGAP17Q68EM7 881 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 USP30Q70CQ3 517 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 STK40Q8N2I9 435 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 CARNMT1Q8N4J0 409 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 OR2T34Q8NGX1 318 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 OR14C36Q8NHC7 312 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 GOLGA1Q92805 767 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 RPL10LQ96L21 214 aaKnown RBP15.67■□□□□ 0.1
SF3A2-204ENST00000589118 PRICKLE1Q96MT3 831 aaPredicted RBP15.67■□□□□ 0.1
SF3A2-204ENST00000589118 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.67■□□□□ 0.1
SF3A2-204ENST00000589118 UBXN6Q9BZV1 441 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 TSPAN16Q9UKR8 245 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 CLCA2Q9UQC9 943 aa15.67■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D3DA0A087WVF3 549 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D3IA0A087WXS9 549 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D3EA0A087X179 549 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D3KA0A087X1G2 549 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TEX51A0A1B0GUA7 166 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D3FA6NER0 549 aaPredicted RBP15.66■□□□□ 0.1
SF3A2-204ENST00000589118 LRRC72A6NJI9 287 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 C10orf142B7Z368 130 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D3LB9A6J9 549 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 K7ELQ4 463 aaPredicted RBP15.66■□□□□ 0.1
SF3A2-204ENST00000589118 CAPN9O14815 690 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 ACTN4O43707 911 aaKnown RBP15.66■□□□□ 0.1
SF3A2-204ENST00000589118 MPOP05164 745 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D3HP0C7X1 549 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 CKMT2P17540 419 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 RGS7P49802 495 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 STK19P49842 368 aaPredicted RBP15.66■□□□□ 0.1
SF3A2-204ENST00000589118 ST8SIA6P61647 398 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D25Q3MII6 688 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 POM121L1PQ3SYA9 428 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 SFMBT2Q5VUG0 894 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 RESP18Q5W5W9 173 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D3GQ6DHY5 549 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D3CQ6IPX1 549 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.66■□□□□ 0.1
SF3A2-204ENST00000589118 MFN1Q8IWA4 741 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TBC1D3Q8IZP1 549 aaPredicted RBP15.66■□□□□ 0.1
SF3A2-204ENST00000589118 APCDD1Q8J025 514 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 CLEC4CQ8WTT0 213 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 TTC17Q96AE7 1141 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 ZNF396Q96N95 335 aaPredicted RBP15.66■□□□□ 0.1
SF3A2-204ENST00000589118 FBRSQ9HAH7 460 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 MAGEF1Q9HAY2 307 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 LRRC4Q9HBW1 653 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 ERVW-1Q9UQF0 538 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 ATMQ13315 3056 aa15.66■□□□□ 0.1
SF3A2-204ENST00000589118 SIGLEC6O43699 453 aa15.65■□□□□ 0.1
SF3A2-204ENST00000589118 ACSL4O60488 711 aa15.65■□□□□ 0.1
SF3A2-204ENST00000589118 RNASEH1O60930 286 aaKnown RBP15.65■□□□□ 0.1
SF3A2-204ENST00000589118 YEATS4O95619 227 aa15.65■□□□□ 0.1
SF3A2-204ENST00000589118 MT-CO3P00414 261 aa15.65■□□□□ 0.1
SF3A2-204ENST00000589118 PRR29P0C7W0 189 aa15.65■□□□□ 0.1
SF3A2-204ENST00000589118 NR2F2P24468 414 aa15.65■□□□□ 0.1
SF3A2-204ENST00000589118 ACTN2P35609 894 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms