RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.59■□□□□ 0.25
RETREG3-206ENST00000588423 ZBTB24O43167 697 aaPredicted RBP16.58■□□□□ 0.24
RETREG3-206ENST00000588423 ASLP04424 464 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 GYPCP04921 128 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 DLDP09622 509 aaKnown RBP16.58■□□□□ 0.24
RETREG3-206ENST00000588423 POLR2EP19388 210 aaKnown RBP16.58■□□□□ 0.24
RETREG3-206ENST00000588423 WASP42768 502 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 LMAN2Q12907 356 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 SRSF5Q13243 272 aaKnown RBP16.58■□□□□ 0.24
RETREG3-206ENST00000588423 FUT11Q495W5 492 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 USP39Q53GS9 565 aaKnown RBP16.58■□□□□ 0.24
RETREG3-206ENST00000588423 PPP1R15BQ5SWA1 713 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 DNAJC24Q6P3W2 148 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 CEP68Q76N32 757 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 CENPIQ92674 756 aaPredicted RBP16.58■□□□□ 0.24
RETREG3-206ENST00000588423 ZC3H10Q96K80 434 aaKnown RBP16.58■□□□□ 0.24
RETREG3-206ENST00000588423 RPRD1AQ96P16 312 aaPredicted RBP16.58■□□□□ 0.24
RETREG3-206ENST00000588423 ANLNQ9NQW6 1124 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 TAS2R14Q9NYV8 317 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 PLA2G4CQ9UP65 541 aa16.58■□□□□ 0.24
RETREG3-206ENST00000588423 LUC7L2Q9Y383 392 aaKnown RBP16.58■□□□□ 0.24
RETREG3-206ENST00000588423 ANKRD62A6NC57 917 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 WASH3PC4AMC7 463 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 I6L893 689 aaPredicted RBP16.57■□□□□ 0.24
RETREG3-206ENST00000588423 DDX3XO00571 662 aaKnown RBP eCLIP16.57■□□□□ 0.243e-16■■■■□ 25.4
RETREG3-206ENST00000588423 CLDN11O75508 207 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 MOCS3O95396 460 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 GABRG2P18507 467 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 GPD1P21695 349 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 RFC1P35251 1148 aaPredicted RBP16.57■□□□□ 0.24
RETREG3-206ENST00000588423 ATXN1P54253 815 aaKnown RBP16.57■□□□□ 0.24
RETREG3-206ENST00000588423 ATP11AP98196 1134 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
RETREG3-206ENST00000588423 TRIM14Q14142 442 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 STARD3Q14849 445 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 FSCBQ5H9T9 825 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 HGSNATQ68CP4 663 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 KIAA1211LQ6NV74 962 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 WDR59Q6PJI9 974 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 PRR23BQ6ZRT6 265 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 PHLDB2Q86SQ0 1253 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 ZNF683Q8IZ20 524 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 CCAR2Q8N163 923 aaKnown RBP16.57■□□□□ 0.24
RETREG3-206ENST00000588423 KDM1BQ8NB78 822 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 HMGB4Q8WW32 186 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 SORCS1Q8WY21 1168 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 IGSF8Q969P0 613 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 LOXL4Q96JB6 756 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 TPSD1Q9BZJ3 242 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 SIK2Q9H0K1 926 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 TMEM245Q9H330 911 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 BCCIPQ9P287 314 aaKnown RBP eCLIP16.57■□□□□ 0.24
RETREG3-206ENST00000588423 GMEB2Q9UKD1 530 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 INTS6Q9UL03 887 aaKnown RBP16.57■□□□□ 0.24
RETREG3-206ENST00000588423 VANGL2Q9ULK5 521 aa16.57■□□□□ 0.24
RETREG3-206ENST00000588423 IGLV3-10A0A075B6K4 115 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 DRGXA6NNA5 263 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 RTN2O75298 545 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 GJB6O95452 261 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 SERPING1P05155 500 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 SKILP12757 684 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 RRM1P23921 792 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 P2RY2P41231 377 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 ZNF143P52747 638 aaPredicted RBP16.56■□□□□ 0.24
RETREG3-206ENST00000588423 PLK1P53350 603 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 CDH4P55283 916 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 NRG1Q02297 640 aaPredicted RBP16.56■□□□□ 0.24
RETREG3-206ENST00000588423 PTPRNQ16849 979 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 C15orf59Q2T9L4 293 aaPredicted RBP16.56■□□□□ 0.24
RETREG3-206ENST00000588423 ARL13BQ3SXY8 428 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 PITRM1Q5JRX3 1037 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 SPECC1LQ69YQ0 1117 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 SERPINA13PQ6UXR4 307 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 LRRC31Q6UY01 552 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.56■□□□□ 0.24
RETREG3-206ENST00000588423 FAM131BQ86XD5 332 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 RNF214Q8ND24 703 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 TRIM11Q96F44 468 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 PPP1R9BQ96SB3 815 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 PARVAQ9NVD7 372 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 NCDNQ9UBB6 729 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 RAD54BQ9Y620 910 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 ATG2BQ96BY7 2078 aa16.56■□□□□ 0.24
RETREG3-206ENST00000588423 USP34Q70CQ2 3546 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 SYNCRIPO60506 623 aaKnown RBP16.55■□□□□ 0.24
RETREG3-206ENST00000588423 ZNF217O75362 1048 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 RETP07949 1114 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 C7P10643 843 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 NDUFV2P19404 249 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 PRKCHP24723 683 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 HNRNPH3P31942 346 aaKnown RBP16.55■□□□□ 0.24
RETREG3-206ENST00000588423 CSKP41240 450 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 HDAC4P56524 1084 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 CDO1Q16878 200 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 PLEKHG6Q3KR16 790 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 PLK5Q496M5 336 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 FNDC3BQ53EP0 1204 aaKnown RBP16.55■□□□□ 0.24
RETREG3-206ENST00000588423 TDRD12Q587J7 1177 aaKnown RBP16.55■□□□□ 0.24
RETREG3-206ENST00000588423 PLEKHA7Q6IQ23 1121 aa16.55■□□□□ 0.24
RETREG3-206ENST00000588423 CXorf57Q6NSI4 855 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms