RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 RNF43Q68DV7 783 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 LRRC31Q6UY01 552 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 TPRG1Q6ZUI0 275 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 NT5DC3Q86UY8 548 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 PSTKQ8IV42 348 aaKnown RBP11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 ETFBKMTQ8IXQ9 262 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 CCAR2Q8N163 923 aaKnown RBP11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 KRT35Q92764 455 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 C8orf33Q9H7E9 229 aaPredicted RBP11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 CWC15Q9P013 229 aaKnown RBP11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 FBXO10Q9UK96 956 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 FBXL21Q9UKT6 434 aa11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 PACSIN2Q9UNF0 486 aaPredicted RBP11.04□□□□□ -0.64
SMARCA4-213ENST00000587988 KIAA1549LQ6ZVL6 1849 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 ANTXRLA6NF34 631 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 EEF2KO00418 725 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 DCXO43602 365 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 LUC7L3O95232 432 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 KRT7P08729 469 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 CISD3P0C7P0 127 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 KDELR1P24390 212 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 IL4RP24394 825 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 HOXC13P31276 330 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 CDH6P55285 790 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 KDSRQ06136 332 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 MMRN1Q13201 1228 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 PON2Q15165 354 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 RABGAP1LQ5R372 815 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 MPP7Q5T2T1 576 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 ACBD5Q5T8D3 534 aaPredicted RBP11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 LRRC38Q5VT99 294 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 RWDD4Q6NW29 188 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 POLNQ7Z5Q5 900 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 ANKS1BQ7Z6G8 1248 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 TFAP2DQ7Z6R9 452 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 NLRP14Q86W24 1093 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 RALGPS2Q86X27 583 aaPredicted RBP11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 MFN1Q8IWA4 741 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 SFTPA1Q8IWL2 248 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 RHOT1Q8IXI2 618 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 SIX5Q8N196 739 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 C17orf53Q8N3J3 647 aaPredicted RBP11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 PHTF2Q8N3S3 785 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 CARNMT1Q8N4J0 409 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 OR52K2Q8NGK3 314 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 FAM71BQ8TC56 605 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 RAPGEF5Q92565 580 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 TSC1Q92574 1164 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 EDAQ92838 391 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 TBC1D31Q96DN5 1066 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 LMLNQ96KR4 655 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 XPO6Q96QU8 1125 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 EPAS1Q99814 870 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 COL25A1Q9BXS0 654 aaPredicted RBP11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 ZYG11BQ9C0D3 744 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 PCDH18Q9HCL0 1135 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 ARHGEF3Q9NR81 526 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 NDFIP2Q9NV92 336 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 DNAJC17Q9NVM6 304 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 PPARGC1AQ9UBK2 798 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 ZNF212Q9UDV6 495 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 AMFRQ9UKV5 643 aa11.03□□□□□ -0.64
SMARCA4-213ENST00000587988 A0A1B0GVM2 712 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 TYW5A2RUC4 315 aaKnown RBP11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 TCAF2A6NFQ2 919 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 C3orf70A6NLC5 250 aaPredicted RBP11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 PI4K2BG5E9Z4 385 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 H0Y626 953 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 PSTPIP1O43586 416 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 CLDN11O75508 207 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 GLULP15104 373 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 CTNNA2P26232 953 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 EPHB2P29323 1055 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 HLA-FP30511 346 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 CD70P32970 193 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 CTNNA1P35221 906 aaKnown RBP11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 NUMBP49757 651 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 CDH4P55283 916 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 STARD6P59095 220 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 TPI1P60174 286 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 PRKCQQ04759 706 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 SIGLEC14Q08ET2 396 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 LMAN2Q12907 356 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 DPYSL3Q14195 570 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 KRT81Q14533 505 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 ZFYVE27Q5T4F4 411 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 TTC39BQ5VTQ0 682 aaPredicted RBP11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 FSTL4Q6MZW2 842 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 CXorf57Q6NSI4 855 aaKnown RBP11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 RFX8Q6ZV50 586 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 CHST9Q7L1S5 443 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 PEX26Q7Z412 305 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 SYCE1Q8N0S2 351 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 KCTD6Q8NC69 237 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 FIBINQ8TAL6 211 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 FAM3CQ92520 227 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 EZH1Q92800 747 aaPredicted RBP11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 PNKPQ96T60 521 aa11.02□□□□□ -0.65
SMARCA4-213ENST00000587988 P2RY13Q9BPV8 354 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms