RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 TOR4AQ9NXH8 423 aa20.08■□□□□ 0.81
TRAF4-216ENST00000586813 KIAA1522Q9P206 1035 aaPredicted RBP20.08■□□□□ 0.81
TRAF4-216ENST00000586813 INTS6Q9UL03 887 aaKnown RBP20.08■□□□□ 0.81
TRAF4-216ENST00000586813 BTBD3Q9Y2F9 522 aa20.08■□□□□ 0.81
TRAF4-216ENST00000586813 ANKRD6Q9Y2G4 727 aa20.08■□□□□ 0.81
TRAF4-216ENST00000586813 CACNA1GO43497 2377 aa20.08■□□□□ 0.8
TRAF4-216ENST00000586813 ADAMTS20P59510 1910 aa20.08■□□□□ 0.8
TRAF4-216ENST00000586813 CABIN1Q9Y6J0 2220 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 ASLP04424 464 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 CSKP41240 450 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 RPL34P49207 117 aaKnown RBP20.07■□□□□ 0.8
TRAF4-216ENST00000586813 ST8SIA6P61647 398 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 CDH18Q13634 790 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 KLHL10Q6JEL2 608 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 USP30Q70CQ3 517 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 SCUBE3Q8IX30 993 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 CARNMT1Q8N4J0 409 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 RHBDD1Q8TEB9 315 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 SLC39A13Q96H72 371 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 MRGPRX3Q96LB0 322 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 ORAI3Q9BRQ5 295 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 PABPC3Q9H361 631 aaKnown RBP20.07■□□□□ 0.8
TRAF4-216ENST00000586813 SCML1Q9UN30 329 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 LHX6Q9UPM6 363 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 NAALADL1Q9UQQ1 740 aa20.07■□□□□ 0.8
TRAF4-216ENST00000586813 NBEAQ8NFP9 2946 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 SART1O43290 800 aaKnown RBP20.06■□□□□ 0.8
TRAF4-216ENST00000586813 SIN3BO75182 1162 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 IGHV4-34P06331 123 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 ATXN1LP0C7T5 689 aaKnown RBP20.06■□□□□ 0.8
TRAF4-216ENST00000586813 SUZ12Q15022 739 aaKnown RBP20.06■□□□□ 0.8
TRAF4-216ENST00000586813 HNRNPA1L2Q32P51 320 aaKnown RBP20.06■□□□□ 0.8
TRAF4-216ENST00000586813 FSCBQ5H9T9 825 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 MS4A13Q5J8X5 152 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 KIAA0895LQ68EN5 471 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 FOXR2Q6PJQ5 311 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 TAC4Q86UU9 113 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 CFAP52Q8N1V2 620 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 ADAM32Q8TC27 787 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 NELFBQ8WX92 580 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 IGSF8Q969P0 613 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 FAM149B1Q96BN6 582 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 KREMEN1Q96MU8 473 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 ST7Q9NRC1 585 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 NCKAP1Q9Y2A7 1128 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 ITPR1Q14643 2758 aa20.06■□□□□ 0.8
TRAF4-216ENST00000586813 COL5A1P20908 1838 aaPredicted RBP20.05■□□□□ 0.8
TRAF4-216ENST00000586813 DKK1O94907 266 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 LUC7L3O95232 432 aaKnown RBP20.05■□□□□ 0.8
TRAF4-216ENST00000586813 MOCS2O96007 188 aaPredicted RBP20.05■□□□□ 0.8
TRAF4-216ENST00000586813 BMP6P22004 513 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 GPD2P43304 727 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 CCT8P50990 548 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 ARID5BQ14865 1188 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 PITRM1Q5JRX3 1037 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 LRSAM1Q6UWE0 723 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 MMS22LQ6ZRQ5 1243 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 CCDC117Q8IWD4 279 aaPredicted RBP20.05■□□□□ 0.8
TRAF4-216ENST00000586813 TRIM59Q8IWR1 403 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 DHX40Q8IX18 779 aaKnown RBP20.05■□□□□ 0.8
TRAF4-216ENST00000586813 ELOA2Q8IYF1 753 aaPredicted RBP20.05■□□□□ 0.8
TRAF4-216ENST00000586813 KDM1BQ8NB78 822 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 EHBP1Q8NDI1 1231 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 GANCQ8TET4 914 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 FBXL12Q9NXK8 326 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 SERGEFQ9UGK8 458 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 CNTN6Q9UQ52 1028 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 CTNND2Q9UQB3 1225 aa20.05■□□□□ 0.8
TRAF4-216ENST00000586813 BICDL2A1A5D9 508 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 FAM47DPA6NHR8 397 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 PPP1R3GB7ZBB8 358 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 KCNK3O14649 394 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 RNASEH1O60930 286 aaKnown RBP20.04■□□□□ 0.8
TRAF4-216ENST00000586813 HOXB3P14651 431 aaPredicted RBP20.04■□□□□ 0.8
TRAF4-216ENST00000586813 CTSKP43235 329 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 ACADSBP45954 432 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 KCNH2Q12809 1159 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 CST6Q15828 149 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 DCAF6Q58WW2 860 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 KCNT1Q5JUK3 1230 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 SYPL2Q5VXT5 272 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 BEND5Q7L4P6 421 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 TMPRSS7Q7RTY8 843 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 ADAT2Q7Z6V5 191 aaKnown RBP20.04■□□□□ 0.8
TRAF4-216ENST00000586813 TRIM62Q9BVG3 475 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 CCDC86Q9H6F5 360 aaKnown RBP20.04■□□□□ 0.8
TRAF4-216ENST00000586813 XPO7Q9UIA9 1087 aaKnown RBP20.04■□□□□ 0.8
TRAF4-216ENST00000586813 ERVW-1Q9UQF0 538 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 CELSR3Q9NYQ7 3312 aa20.04■□□□□ 0.8
TRAF4-216ENST00000586813 ITIH6Q6UXX5 1313 aa20.03■□□□□ 0.8
TRAF4-216ENST00000586813 A0A1W2PP55 124 aa20.03■□□□□ 0.8
TRAF4-216ENST00000586813 GOLGA8CPA6NN73 597 aa20.03■□□□□ 0.8
TRAF4-216ENST00000586813 H0Y8X5 98 aa20.03■□□□□ 0.8
TRAF4-216ENST00000586813 CAPN9O14815 690 aa20.03■□□□□ 0.8
TRAF4-216ENST00000586813 MID1O15344 667 aa20.03■□□□□ 0.8
TRAF4-216ENST00000586813 PCDHGA12O60330 932 aa20.03■□□□□ 0.8
TRAF4-216ENST00000586813 APOEP02649 317 aa20.03■□□□□ 0.8
TRAF4-216ENST00000586813 SRPRAP08240 638 aaKnown RBP20.03■□□□□ 0.8
TRAF4-216ENST00000586813 KRT5P13647 590 aa20.03■□□□□ 0.8
TRAF4-216ENST00000586813 CTSOP43234 321 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms