RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 ARTNQ5T4W7 220 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 SPECC1LQ69YQ0 1117 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 WDR59Q6PJI9 974 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 SARM1Q6SZW1 724 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 CHST9Q7L1S5 443 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 ALYREFQ86V81 257 aaKnown RBP16.79■□□□□ 0.28
ERBB2-222ENST00000584908 ZNF683Q8IZ20 524 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 CHPFQ8IZ52 775 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 CFAP52Q8N1V2 620 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 MDGA1Q8NFP4 955 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 GAB3Q8WWW8 586 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 HAPLN3Q96S86 360 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 SELENOOQ9BVL4 669 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 STIM2Q9P246 746 aa16.79■□□□□ 0.28
ERBB2-222ENST00000584908 IGLV3-10A0A075B6K4 115 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 A0A1B0GVM2 712 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 TCAF2A6NFQ2 919 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 GFRA3O60609 400 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 RTN2O75298 545 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 GJB6O95452 261 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 SERPING1P05155 500 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 HOXB2P14652 356 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 RRM1P23921 792 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 CASP14P31944 242 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 LMAN2Q12907 356 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 SLC12A1Q13621 1099 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 CDH18Q13634 790 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 ZNF234Q14588 700 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 C15orf59Q2T9L4 293 aaPredicted RBP16.78■□□□□ 0.28
ERBB2-222ENST00000584908 FSCBQ5H9T9 825 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 PLEKHA7Q6IQ23 1121 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 SDE2Q6IQ49 451 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 DNAJC24Q6P3W2 148 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 PHLDB2Q86SQ0 1253 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 VSTM4Q8IW00 320 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 DRC7Q8IY82 874 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 CCAR2Q8N163 923 aaKnown RBP16.78■□□□□ 0.28
ERBB2-222ENST00000584908 CARNMT1Q8N4J0 409 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 CPLX3Q8WVH0 158 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 IGSF8Q969P0 613 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 TTC17Q96AE7 1141 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 ISCUQ9H1K1 167 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 CACNA2D2Q9NY47 1150 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 INTS6Q9UL03 887 aaKnown RBP16.78■□□□□ 0.28
ERBB2-222ENST00000584908 STON1Q9Y6Q2 735 aa16.78■□□□□ 0.28
ERBB2-222ENST00000584908 PTPRZ1P23471 2315 aaPredicted RBP16.78■□□□□ 0.28
ERBB2-222ENST00000584908 DLDP09622 509 aaKnown RBP16.77■□□□□ 0.28
ERBB2-222ENST00000584908 C7P10643 843 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 GPD1P21695 349 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 IL12RB1P42701 662 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 ZNF143P52747 638 aaPredicted RBP16.77■□□□□ 0.28
ERBB2-222ENST00000584908 RPL7AP62424 266 aaKnown RBP16.77■□□□□ 0.28
ERBB2-222ENST00000584908 ATP11AP98196 1134 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 PTPRNQ16849 979 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 FUT11Q495W5 492 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 RAB6CQ53S08 254 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 SH3PXD2AQ5TCZ1 1133 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 MBLAC2Q68D91 279 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 ANO7Q6IWH7 933 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 C14orf80Q86SX3 495 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 FAM131BQ86XD5 332 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 CCDC117Q8IWD4 279 aaPredicted RBP16.77■□□□□ 0.28
ERBB2-222ENST00000584908 RPRD1AQ96P16 312 aaPredicted RBP16.77■□□□□ 0.28
ERBB2-222ENST00000584908 DNAJC7Q99615 494 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 CIPCQ9C0C6 399 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 RAB6CQ9H0N0 254 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 TMEM245Q9H330 911 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 KIAA1522Q9P206 1035 aaPredicted RBP16.77■□□□□ 0.28
ERBB2-222ENST00000584908 VANGL2Q9ULK5 521 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 SMG5Q9UPR3 1016 aaKnown RBP16.77■□□□□ 0.28
ERBB2-222ENST00000584908 CFAP54Q96N23 3096 aa16.77■□□□□ 0.28
ERBB2-222ENST00000584908 CHD5Q8TDI0 1954 aa16.77■□□□□ 0.27
ERBB2-222ENST00000584908 DRGXA6NNA5 263 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 WASH3PC4AMC7 463 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 H0Y626 953 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 CLDN11O75508 207 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 RPP40O75818 363 aaKnown RBP16.76■□□□□ 0.27
ERBB2-222ENST00000584908 FTLP02792 175 aaPredicted RBP16.76■□□□□ 0.27
ERBB2-222ENST00000584908 ATP5BP06576 529 aaKnown RBP16.76■□□□□ 0.27
ERBB2-222ENST00000584908 GABRG2P18507 467 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 POLR2EP19388 210 aaKnown RBP16.76■□□□□ 0.27
ERBB2-222ENST00000584908 ADRA1BP35368 520 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 WASP42768 502 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 PLK1P53350 603 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 OXCT1P55809 520 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 HDAC4P56524 1084 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 NRG1Q02297 640 aaPredicted RBP16.76■□□□□ 0.27
ERBB2-222ENST00000584908 SRSF5Q13243 272 aaKnown RBP16.76■□□□□ 0.27
ERBB2-222ENST00000584908 MAMLD1Q13495 774 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 TDRD12Q587J7 1177 aaKnown RBP16.76■□□□□ 0.27
ERBB2-222ENST00000584908 CXorf57Q6NSI4 855 aaKnown RBP16.76■□□□□ 0.27
ERBB2-222ENST00000584908 KIAA1211LQ6NV74 962 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 KDM1BQ8NB78 822 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 FAM172AQ8WUF8 416 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 SORCS1Q8WY21 1168 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 NTAN1Q96AB6 310 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 ZC3H10Q96K80 434 aaKnown RBP16.76■□□□□ 0.27
ERBB2-222ENST00000584908 MCEEQ96PE7 176 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 SIK2Q9H0K1 926 aa16.76■□□□□ 0.27
ERBB2-222ENST00000584908 TMPRSS4Q9NRS4 437 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms