RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 FBXO43Q4G163 708 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 PREPLQ4J6C6 727 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 ADGRF1Q5T601 910 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 DAB2IPQ5VWQ8 1189 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 NAIF1Q69YI7 327 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 C11orf63Q6NUN7 778 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 SND1Q7KZF4 910 aaKnown RBP eCLIP16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 CPNE8Q86YQ8 564 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 ETFBKMTQ8IXQ9 262 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 CCDC26Q8TAB7 109 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 FCRL2Q96LA5 508 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 NCAPGQ9BPX3 1015 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 IRX2Q9BZI1 471 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.54■□□□□ 0.242e-8■■□□□ 13.7
CSNK1D-223ENST00000584472 CAPN6Q9Y6Q1 641 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 GOLGA6L9A6NEM1 432 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 PENKP01210 267 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 CCR1P32246 355 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 PCK1P35558 622 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 SLC1A1P43005 524 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 SLC11A2P49281 568 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 MTAPQ13126 283 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 ZC3H12AQ5D1E8 599 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 BRMS1LQ5PSV4 323 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 FAM131BQ86XD5 332 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 SPEM1Q8N4L4 309 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 LRRC57Q8N9N7 239 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 PNKPQ96T60 521 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 BBS2Q9BXC9 721 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 GOLPH3Q9H4A6 298 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 WDCPQ9H6R7 721 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 FBRSL1Q9HCM7 1045 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 ALG6Q9Y672 507 aa16.53■□□□□ 0.24
CSNK1D-223ENST00000584472 SPTBN4Q9H254 2564 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 KCNU1A8MYU2 1149 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 NEDD8-MDP1E9PL57 170 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 TULP3O75386 442 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 PALMO75781 387 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 EGFP01133 1207 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 APOEP02649 317 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 CYBBP04839 570 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 SLC2A3P11169 496 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 TDGF1P13385 188 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 TYRP14679 529 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 COMTP21964 271 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 MIPP30301 263 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 HOXA6P31267 233 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 MTA1Q13330 715 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 SCYL2Q6P3W7 929 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 TPGS1Q6ZTW0 290 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 SLFN11Q7Z7L1 901 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 DAAM2Q86T65 1068 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 C12orf40Q86WS4 652 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 SUMF1Q8NBK3 374 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 RNF34Q969K3 372 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 XPO6Q96QU8 1125 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 TKTL2Q9H0I9 626 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 EPC1Q9H2F5 836 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 ANLNQ9NQW6 1124 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 ARHGEF4Q9NR80 690 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 RBM12Q9NTZ6 932 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 ARHGEF38Q9NXL2 777 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 DEC1Q9P2X7 70 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 HYOU1Q9Y4L1 999 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 R4GN57 208 aa16.52■□□□□ 0.24
CSNK1D-223ENST00000584472 A0A0A0MRY4 1105 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 GFRA2O00451 464 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 ACSL4O60488 711 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 KAT7O95251 611 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 APODP05090 189 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 TCF4P15884 667 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 GRIA2P42262 883 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 TAS2R40P59535 323 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 SLC25A11Q02978 314 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 FYB2Q5VWT5 728 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 Q6ZS52 159 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 CYP4V2Q6ZWL3 525 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 SYCE1Q8N0S2 351 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 C17orf53Q8N3J3 647 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 PHTF2Q8N3S3 785 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 CCDC185Q8N715 623 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 RUBCNQ92622 972 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 EZH1Q92800 747 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 NTAN1Q96AB6 310 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 PEBP4Q96S96 227 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 DDX50Q9BQ39 737 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 DNAJC17Q9NVM6 304 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 PCSK1NQ9UHG2 260 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 USP18Q9UMW8 372 aa16.51■□□□□ 0.23
CSNK1D-223ENST00000584472 DMXL1Q9Y485 3027 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 I6L893 689 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 SPOPO43791 374 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 PRPSAP2O60256 369 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 ATG13O75143 517 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 IL1R2P27930 398 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 ADRA1BP35368 520 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 SLC6A11P48066 632 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 CSTF1Q05048 431 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 GAS6Q14393 721 aa16.5■□□□□ 0.23
CSNK1D-223ENST00000584472 ARL13BQ3SXY8 428 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms