RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 LIASO43766 372 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 IRAK1P51617 712 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 SLC10A2Q12908 348 aaPredicted RBP18.7■□□□□ 0.58
NDEL1-217ENST00000583683 SNX1Q13596 522 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 PAFAH1B3Q15102 231 aaKnown RBP18.7■□□□□ 0.58
NDEL1-217ENST00000583683 RFWD3Q6PCD5 774 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 ARID3BQ8IVW6 561 aaPredicted RBP18.7■□□□□ 0.58
NDEL1-217ENST00000583683 RIN3Q8TB24 985 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 SH3RF2Q8TEC5 729 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 PABPC5Q96DU9 382 aaKnown RBP18.7■□□□□ 0.58
NDEL1-217ENST00000583683 MPP6Q9NZW5 540 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 LSM7Q9UK45 103 aaKnown RBP18.7■□□□□ 0.58
NDEL1-217ENST00000583683 DNPEPQ9ULA0 475 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 SH3BP1Q9Y3L3 701 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 BRWD1Q9NSI6 2320 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 DRGXA6NNA5 263 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 F5H5T6 163 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 FGF10O15520 208 aaPredicted RBP18.7■□□□□ 0.58
NDEL1-217ENST00000583683 CHRNA3P32297 505 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 NOMO1Q15155 1222 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 C5orf22Q49AR2 442 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 CES5AQ6NT32 575 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 CCDC137Q6PK04 289 aaKnown RBP18.7■□□□□ 0.58
NDEL1-217ENST00000583683 TMCO3Q6UWJ1 677 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 EP400NLQ6ZTU2 488 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 DDX42Q86XP3 938 aaKnown RBP eCLIP18.7■□□□□ 0.58
NDEL1-217ENST00000583683 LGI2Q8N0V4 545 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 MICALL1Q8N3F8 863 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 SLC35B2Q8TB61 432 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 ZSCAN18Q8TBC5 510 aaPredicted RBP18.7■□□□□ 0.58
NDEL1-217ENST00000583683 FGF13Q92913 245 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 MSLNLQ96KJ4 702 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 RPRD1AQ96P16 312 aaPredicted RBP18.7■□□□□ 0.58
NDEL1-217ENST00000583683 ZYG11BQ9C0D3 744 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 CATSPERBQ9H7T0 1116 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 DTLQ9NZJ0 730 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 AMACRQ9UHK6 382 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 DOCK8Q8NF50 2099 aa18.7■□□□□ 0.58
NDEL1-217ENST00000583683 DENND4AQ7Z401 1863 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 MFSD11O43934 449 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 MAP3K6O95382 1288 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 COILP38432 576 aaPredicted RBP18.69■□□□□ 0.58
NDEL1-217ENST00000583683 KCNJ1P48048 391 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 NR2C2P49116 596 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 ALFQ53S48 1182 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 ATAT1Q5SQI0 421 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 TEX35Q5T0J7 233 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 DRICH1Q6PGQ1 229 aaPredicted RBP18.69■□□□□ 0.58
NDEL1-217ENST00000583683 GET4Q7L5D6 327 aaPredicted RBP18.69■□□□□ 0.58
NDEL1-217ENST00000583683 NLRP14Q86W24 1093 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 NPWQ8N729 165 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 PRICKLE1Q96MT3 831 aaPredicted RBP18.69■□□□□ 0.58
NDEL1-217ENST00000583683 FRMD8P1Q9BZ68 369 aaPredicted RBP18.69■□□□□ 0.58
NDEL1-217ENST00000583683 PCYOX1Q9UHG3 505 aa18.69■□□□□ 0.58
NDEL1-217ENST00000583683 PRUNE2Q8WUY3 3088 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 E2F8A0AVK6 867 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 CNTN5O94779 1100 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 WEE1P30291 646 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 FNTAP49354 379 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 BYSLQ13895 437 aaKnown RBP18.68■□□□□ 0.58
NDEL1-217ENST00000583683 OASLQ15646 514 aaKnown RBP18.68■□□□□ 0.58
NDEL1-217ENST00000583683 BBS7Q8IWZ6 715 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 FAM217AQ8IXS0 508 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 RTL3Q8N8U3 475 aaKnown RBP18.68■□□□□ 0.58
NDEL1-217ENST00000583683 NKD2Q969F2 451 aaPredicted RBP18.68■□□□□ 0.58
NDEL1-217ENST00000583683 LRRC1Q9BTT6 524 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 KLC2Q9H0B6 622 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 NDFIP2Q9NV92 336 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.68■□□□□ 0.58
NDEL1-217ENST00000583683 ZNF510Q9Y2H8 683 aa18.68■□□□□ 0.58
NDEL1-217ENST00000583683 V9GYY5 206 aaPredicted RBP18.68■□□□□ 0.58
NDEL1-217ENST00000583683 WASH4PA8MWX3 477 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 TRDMT1O14717 391 aaKnown RBP18.67■□□□□ 0.58
NDEL1-217ENST00000583683 TCF3P15923 654 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 RHOQP17081 205 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 VCPP55072 806 aaKnown RBP18.67■□□□□ 0.58
NDEL1-217ENST00000583683 MRPS25P82663 173 aaKnown RBP18.67■□□□□ 0.58
NDEL1-217ENST00000583683 ZNF77Q15935 545 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 CFAP52Q8N1V2 620 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 NETO2Q8NC67 525 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 OLFM3Q96PB7 478 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 DDX50Q9BQ39 737 aaKnown RBP18.67■□□□□ 0.58
NDEL1-217ENST00000583683 GDE1Q9NZC3 331 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 ZNF212Q9UDV6 495 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 GFRA2O00451 464 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 MCF2LO15068 1137 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 SGSHP51688 502 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 EIF3EP60228 445 aaKnown RBP18.67■□□□□ 0.58
NDEL1-217ENST00000583683 TUBB4BP68371 445 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 ERCC6LQ2NKX8 1250 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 C8orf74Q6P047 294 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 TFAP2DQ7Z6R9 452 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 ZC3H18Q86VM9 953 aaKnown RBP18.67■□□□□ 0.58
NDEL1-217ENST00000583683 CIR1Q86X95 450 aaPredicted RBP18.67■□□□□ 0.58
NDEL1-217ENST00000583683 TP53INP2Q8IXH6 220 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 CCDC105Q8IYK2 499 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 CCDC33Q8N5R6 958 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 UBXN4Q92575 508 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 ASB16Q96NS5 453 aa18.67■□□□□ 0.58
NDEL1-217ENST00000583683 TMEM248Q9NWD8 314 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms