RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ZBED6P86452 979 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 LMAN2Q12907 356 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 AUHQ13825 339 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 ZNF234Q14588 700 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 STARD3Q14849 445 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 C15orf59Q2T9L4 293 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 CCDC14Q49A88 953 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 FNDC3BQ53EP0 1204 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 TTC39BQ5VTQ0 682 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 MBLAC2Q68D91 279 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 RNF43Q68DV7 783 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 FBXL22Q6P050 247 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 RASSF3Q86WH2 238 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 FAM131BQ86XD5 332 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 MCOLN2Q8IZK6 566 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 OLIG1Q8TAK6 271 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 CYB5D2Q8WUJ1 264 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 GAB3Q8WWW8 586 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 GABRG3Q99928 467 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 ANLNQ9NQW6 1124 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 ARHGEF38Q9NXL2 777 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 THAP10Q9P2Z0 257 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 NCDNQ9UBB6 729 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 CAPN11Q9UMQ6 739 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 LUC7L2Q9Y383 392 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.02□□□□□ -0.335e-7■■■□□ 18.8
SMARCE1-218ENST00000582955 ITIH6Q6UXX5 1313 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 ZFHX2Q9C0A1 2572 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 A0A1B0GVM2 712 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 A0A1W2PQF6 199 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 TCAF2A6NFQ2 919 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 SIGLEC16A6NMB1 481 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 GYPCP04921 128 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 ATP5BP06576 529 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 GPD1P21695 349 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 RRM1P23921 792 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 RFC1P35251 1148 aaPredicted RBP13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 FUT11Q495W5 492 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 USP39Q53GS9 565 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 FSCBQ5H9T9 825 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 KIAA1211LQ6NV74 962 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 DCUN1D2Q6PH85 259 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 WDR59Q6PJI9 974 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 SERPINA13PQ6UXR4 307 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 KIAA0907Q7Z7F0 614 aaPredicted RBP13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 C14orf80Q86SX3 495 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 ADIPOR2Q86V24 386 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 DNAAF5Q86Y56 855 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 CCAR2Q8N163 923 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 IGSF8Q969P0 613 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 MCEEQ96PE7 176 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 TMPRSS4Q9NRS4 437 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 KIAA1522Q9P206 1035 aaPredicted RBP13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 PLA2G4CQ9UP65 541 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 INVSQ9Y283 1065 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 SNX10Q9Y5X0 201 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 PIEZO1Q92508 2521 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 USP34Q70CQ2 3546 aa13.01□□□□□ -0.33
SMARCE1-218ENST00000582955 I6L893 689 aaPredicted RBP13□□□□□ -0.33
SMARCE1-218ENST00000582955 DDX3XO00571 662 aaKnown RBP eCLIP13□□□□□ -0.336e-10■■■□□ 17.5
SMARCE1-218ENST00000582955 ATMINO43313 823 aaPredicted RBP13□□□□□ -0.33
SMARCE1-218ENST00000582955 SYNCRIPO60506 623 aaKnown RBP13□□□□□ -0.33
SMARCE1-218ENST00000582955 ENDOD1O94919 500 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 MOCS3O95396 460 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 SERPING1P05155 500 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 EPHX1P07099 455 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 DESP17661 470 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 GABRG2P18507 467 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 PRKCHP24723 683 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 CASP14P31944 242 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 CSKP41240 450 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 PTPN9P43378 593 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 IRAK1P51617 712 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 ARL13BQ3SXY8 428 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 RAB6CQ53S08 254 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 SH3PXD2AQ5TCZ1 1133 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 SPECC1LQ69YQ0 1117 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 LRRC31Q6UY01 552 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 STRADAQ7RTN6 431 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 BNIPLQ7Z465 357 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 VPS36Q86VN1 386 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 FAM172AQ8WUF8 416 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 RUBCNQ92622 972 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 SYN2Q92777 582 aaPredicted RBP13□□□□□ -0.33
SMARCE1-218ENST00000582955 VCPIP1Q96JH7 1222 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 SPACA7Q96KW9 195 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 RAB6CQ9H0N0 254 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 GMEB2Q9UKD1 530 aa13□□□□□ -0.33
SMARCE1-218ENST00000582955 FARP1Q9Y4F1 1045 aaPredicted RBP13□□□□□ -0.33
SMARCE1-218ENST00000582955 BZW2Q9Y6E2 419 aaKnown RBP13□□□□□ -0.33
SMARCE1-218ENST00000582955 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 TCRBV5S1A1TA0A578 114 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 DCLK1O15075 740 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 CCP110O43303 1012 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 SRGAP2O75044 1071 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms