RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 NOP14P78316 857 aaKnown RBP10.76□□□□□ -0.69
SS18-221ENST00000582448 ROR1Q01973 937 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 TAGLNQ01995 201 aaKnown RBP10.76□□□□□ -0.69
SS18-221ENST00000582448 TMEM132DQ14C87 1099 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 MEI1Q5TIA1 1274 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 CD300LGQ6UXG3 332 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 VITQ6UXI7 678 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 CEP68Q76N32 757 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 ELMOD1Q8N336 334 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 OR5B17Q8NGF7 314 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 ZNF461Q8TAF7 563 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 TTC8Q8TAM2 541 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 FAXDC2Q96IV6 333 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 ZNF512Q96ME7 567 aaPredicted RBP10.76□□□□□ -0.69
SS18-221ENST00000582448 TSPAN18Q96SJ8 248 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 PI4K2AQ9BTU6 479 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 MTMR12Q9C0I1 747 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 GPR88Q9GZN0 384 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 DNAI2Q9GZS0 605 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 SLITRK6Q9H5Y7 841 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 PLEKHA5Q9HAU0 1116 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 RBM12Q9NTZ6 932 aaKnown RBP10.76□□□□□ -0.69
SS18-221ENST00000582448 RALYQ9UKM9 306 aaKnown RBP10.76□□□□□ -0.69
SS18-221ENST00000582448 DERAQ9Y315 318 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 JRKLQ9Y4A0 524 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 PCDHB4Q9Y5E5 795 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 BACE2Q9Y5Z0 518 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 U3KQE9 123 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 WDR87Q6ZQQ6 2873 aa10.76□□□□□ -0.69
SS18-221ENST00000582448 SPTBN2O15020 2390 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 LACTBL1A8MY62 500 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 DDX3XO00571 662 aaKnown RBP eCLIP10.75□□□□□ -0.691e-15■■■□□ 17.7
SS18-221ENST00000582448 XPOTO43592 962 aaKnown RBP10.75□□□□□ -0.69
SS18-221ENST00000582448 VNN1O95497 513 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 ASS1P00966 412 aaKnown RBP10.75□□□□□ -0.69
SS18-221ENST00000582448 TDGF1P13385 188 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 CYP11B1P15538 503 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 PSMC3P17980 439 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 FCARP24071 287 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 KPNA1P52294 538 aaPredicted RBP10.75□□□□□ -0.69
SS18-221ENST00000582448 DAB2P98082 770 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 CDR2Q01850 454 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 MYO1EQ12965 1108 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 INPP5AQ14642 412 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 CCDC6Q16204 474 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 UPP1Q16831 310 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 ZNF667Q5HYK9 610 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 IL31Q6EBC2 164 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 RTL10Q7L3V2 364 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 YAF2Q8IY57 180 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 SYCE1Q8N0S2 351 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 TTC39CQ8N584 583 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 CEP112Q8N8E3 955 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 CSGALNACT1Q8TDX6 532 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 KAT5Q92993 513 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 GAL3ST3Q96A11 431 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 KREMEN1Q96MU8 473 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 KRTAP4-8Q9BYQ9 185 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 L2HGDHQ9H9P8 463 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 SSU72Q9NP77 194 aaKnown RBP10.75□□□□□ -0.69
SS18-221ENST00000582448 TRIM10Q9UDY6 481 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 ITGA11Q9UKX5 1188 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 C2CD2Q9Y426 696 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 PTPRJQ12913 1337 aa10.75□□□□□ -0.69
SS18-221ENST00000582448 TPRP12270 2363 aaKnown RBP10.75□□□□□ -0.69
SS18-221ENST00000582448 A0A0A6YYK5 440 aaPredicted RBP10.74□□□□□ -0.69
SS18-221ENST00000582448 A0A0U1RQJ8 604 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 SMIM28A0A1B0GU29 152 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 ARHGEF37A1IGU5 675 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 ANKRD62A6NC57 917 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 HEPACAM2A8MVW5 462 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 H7C4K7 107 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 TMEM189-UBE2V1I3L0A0 370 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 PODXLO00592 558 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 DYNC1I1O14576 645 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 RTN2O75298 545 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 MOCS3O95396 460 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 PRNPP04156 253 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 TMEM253P0C7T8 217 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 CHRNB1P11230 501 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 GZMAP12544 262 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 ATF2P15336 505 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 SOX9P48436 509 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 MYL6P60660 151 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 RBP5P82980 135 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 CKAP4Q07065 602 aaKnown RBP10.74□□□□□ -0.69
SS18-221ENST00000582448 TWF1Q12792 350 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 CSRP2Q16527 193 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 WHAMMP3Q1A5X7 153 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 AASDHQ4L235 1098 aaPredicted RBP10.74□□□□□ -0.69
SS18-221ENST00000582448 CTXN3Q4LDR2 81 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 JADE1Q6IE81 842 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 TRIM72Q6ZMU5 477 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 RHOT2Q8IXI1 618 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 BEST2Q8NFU1 509 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 SLC30A5Q8TAD4 765 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 ZSCAN18Q8TBC5 510 aaPredicted RBP10.74□□□□□ -0.69
SS18-221ENST00000582448 SMARCD2Q92925 531 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 UROC1Q96N76 676 aa10.74□□□□□ -0.69
SS18-221ENST00000582448 PPP1R10Q96QC0 940 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms