RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 TM9SF3Q9HD45 589 aa11.01□□□□□ -0.65
RFFL-209ENST00000581265 TOR4AQ9NXH8 423 aa11.01□□□□□ -0.65
RFFL-209ENST00000581265 SCML1Q9UN30 329 aa11.01□□□□□ -0.65
RFFL-209ENST00000581265 ANKRD6Q9Y2G4 727 aa11.01□□□□□ -0.65
RFFL-209ENST00000581265 SNX11Q9Y5W9 270 aa11.01□□□□□ -0.65
RFFL-209ENST00000581265 IGSF10Q6WRI0 2623 aa11.01□□□□□ -0.65
RFFL-209ENST00000581265 GOLGA6L4A6NEF3 574 aa11□□□□□ -0.65
RFFL-209ENST00000581265 CYSRT1A8MQ03 144 aa11□□□□□ -0.65
RFFL-209ENST00000581265 J3QKU1 62 aa11□□□□□ -0.65
RFFL-209ENST00000581265 PIK3R2O00459 728 aa11□□□□□ -0.65
RFFL-209ENST00000581265 CAPN9O14815 690 aa11□□□□□ -0.65
RFFL-209ENST00000581265 PSMA7O14818 248 aa11□□□□□ -0.65
RFFL-209ENST00000581265 PCDHGA12O60330 932 aa11□□□□□ -0.65
RFFL-209ENST00000581265 ASLP04424 464 aa11□□□□□ -0.65
RFFL-209ENST00000581265 ATXN1LP0C7T5 689 aaKnown RBP11□□□□□ -0.65
RFFL-209ENST00000581265 ABCG1P45844 678 aa11□□□□□ -0.65
RFFL-209ENST00000581265 GCNT1Q02742 428 aa11□□□□□ -0.65
RFFL-209ENST00000581265 CETN1Q12798 172 aa11□□□□□ -0.65
RFFL-209ENST00000581265 NNTQ13423 1086 aa11□□□□□ -0.65
RFFL-209ENST00000581265 STIM1Q13586 685 aa11□□□□□ -0.65
RFFL-209ENST00000581265 HNRNPA1L2Q32P51 320 aaKnown RBP11□□□□□ -0.65
RFFL-209ENST00000581265 TTC31Q49AM3 519 aaPredicted RBP11□□□□□ -0.65
RFFL-209ENST00000581265 ZNF776Q68DI1 518 aaPredicted RBP11□□□□□ -0.65
RFFL-209ENST00000581265 NADSYN1Q6IA69 706 aa11□□□□□ -0.65
RFFL-209ENST00000581265 FOXR2Q6PJQ5 311 aa11□□□□□ -0.65
RFFL-209ENST00000581265 BEND5Q7L4P6 421 aa11□□□□□ -0.65
RFFL-209ENST00000581265 MFN1Q8IWA4 741 aa11□□□□□ -0.65
RFFL-209ENST00000581265 SCUBE3Q8IX30 993 aa11□□□□□ -0.65
RFFL-209ENST00000581265 ELOA2Q8IYF1 753 aaPredicted RBP11□□□□□ -0.65
RFFL-209ENST00000581265 PPM1KQ8N3J5 372 aa11□□□□□ -0.65
RFFL-209ENST00000581265 HJURPQ8NCD3 748 aaPredicted RBP11□□□□□ -0.65
RFFL-209ENST00000581265 CLEC4CQ8WTT0 213 aa11□□□□□ -0.65
RFFL-209ENST00000581265 SNX19Q92543 992 aa11□□□□□ -0.65
RFFL-209ENST00000581265 ERCC4Q92889 916 aaPredicted RBP11□□□□□ -0.65
RFFL-209ENST00000581265 KAT5Q92993 513 aa11□□□□□ -0.65
RFFL-209ENST00000581265 IGSF8Q969P0 613 aa11□□□□□ -0.65
RFFL-209ENST00000581265 SLC39A13Q96H72 371 aa11□□□□□ -0.65
RFFL-209ENST00000581265 FCRL2Q96LA5 508 aaPredicted RBP11□□□□□ -0.65
RFFL-209ENST00000581265 DCBLD2Q96PD2 775 aa11□□□□□ -0.65
RFFL-209ENST00000581265 STIM2Q9P246 746 aa11□□□□□ -0.65
RFFL-209ENST00000581265 HOOK1Q9UJC3 728 aaKnown RBP11□□□□□ -0.65
RFFL-209ENST00000581265 INTS6Q9UL03 887 aaKnown RBP11□□□□□ -0.65
RFFL-209ENST00000581265 CNTN6Q9UQ52 1028 aa11□□□□□ -0.65
RFFL-209ENST00000581265 NCKAP1Q9Y2A7 1128 aa11□□□□□ -0.65
RFFL-209ENST00000581265 TLR6Q9Y2C9 796 aa11□□□□□ -0.65
RFFL-209ENST00000581265 URB1O60287 2271 aaKnown RBP11□□□□□ -0.65
RFFL-209ENST00000581265 PLXNB3Q9ULL4 1909 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 C10orf142B7Z368 130 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 M0QYV0 167 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 ATXN7O15265 892 aaPredicted RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 PAPSS1O43252 624 aaPredicted RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 SART1O43290 800 aaKnown RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 TNFSF14O43557 240 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 DFNA5O60443 496 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 FSBPO95073 299 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 IGHV4-34P06331 123 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 BRD2P25440 801 aaKnown RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 PPP1R2P41236 205 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 CSKP41240 450 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 CTSKP43235 329 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 GRK6P43250 576 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 GPD2P43304 727 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 GALCP54803 685 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 ST8SIA6P61647 398 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 RPS24P62847 133 aaKnown RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 RACK1P63244 317 aaKnown RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 CYP4F3Q08477 520 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 SFSWAPQ12872 951 aaKnown RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 MS4A13Q5J8X5 152 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 KIAA0895LQ68EN5 471 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 DQX1Q8TE96 717 aaKnown RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 STK32AQ8WU08 396 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 MYEOVQ96EZ4 313 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 CRELD1Q96HD1 420 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 MRGPRX3Q96LB0 322 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 PRICKLE1Q96MT3 831 aaPredicted RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 SERPINB11Q96P15 392 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 MIS12Q9H081 205 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 PABPC3Q9H361 631 aaKnown RBP10.99□□□□□ -0.65
RFFL-209ENST00000581265 MTG2Q9H4K7 406 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 FBXL12Q9NXK8 326 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 DKK4Q9UBT3 224 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 NAALADL1Q9UQQ1 740 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 BTBD3Q9Y2F9 522 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 ASXL3Q9C0F0 2248 aa10.99□□□□□ -0.65
RFFL-209ENST00000581265 A0A1W2PPC4 97 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 TARSL2A2RTX5 802 aaKnown RBP10.98□□□□□ -0.65
RFFL-209ENST00000581265 TYW5A2RUC4 315 aaKnown RBP10.98□□□□□ -0.65
RFFL-209ENST00000581265 H0Y8X5 98 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 KCNK3O14649 394 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 VILLO15195 856 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 RNASEH1O60930 286 aaKnown RBP10.98□□□□□ -0.65
RFFL-209ENST00000581265 SIN3BO75182 1162 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 CALCAP01258 141 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 SRPRAP08240 638 aaKnown RBP10.98□□□□□ -0.65
RFFL-209ENST00000581265 ACADSBP45954 432 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 CST6Q15828 149 aa10.98□□□□□ -0.65
RFFL-209ENST00000581265 MEA1Q16626 185 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms