RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 FAM167BQ9BTA0 163 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 SCNM1Q9BWG6 230 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 ERVK-5Q9HDB9 667 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 SAYSD1Q9NPB0 183 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 TMEM184CQ9NVA4 438 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 IPO11Q9UI26 975 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 KCND3Q9UK17 655 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 BAG5Q9UL15 447 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 BTBD3Q9Y2F9 522 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 E7EVH7 732 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 ADAM10O14672 748 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 KRT38O76015 456 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 HEXIM1O94992 359 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 TFEBP19484 476 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 HOXD9P28356 352 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 PCP4P48539 62 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 PRKAA2P54646 552 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 ID2Q02363 134 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 Q4G0T1 1027 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 LIPMQ5VYY2 423 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 DGAT2L7PQ6IED9 249 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 ZNF474Q6S9Z5 364 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 FAM57BQ71RH2 274 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 UBE2Q1Q7Z7E8 422 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 ADGRF4Q8IZF3 695 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 FAM47BQ8NA70 645 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 GOLGA1Q92805 767 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 LMTK3Q96Q04 1460 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 ZNF347Q96SE7 839 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 OSBPL5Q9H0X9 879 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 MOV10Q9HCE1 1003 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 KIF17Q9P2E2 1029 aa5.1□□□□□ -1.59
SMCHD1-204ENST00000581226 TPD52L2O43399 206 aaKnown RBP5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 PIP5K1CO60331 668 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 DHRS4L1P0CG22 281 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 CTSAP10619 480 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 CDK4P11802 303 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 CUL4BQ13620 913 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 KIAA1324Q6UXG2 1013 aaKnown RBP5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 SYNE3Q6ZMZ3 975 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 SYT13Q7L8C5 426 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 ARL14EPQ8N8R7 260 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 ANKRD42Q8N9B4 389 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 DENND1AQ8TEH3 1009 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 ZFPM2Q8WW38 1151 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 RPL36ALQ969Q0 106 aaKnown RBP5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 TRIM63Q969Q1 353 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 TBC1D20Q96BZ9 403 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 PIGSQ96S52 555 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 ABHD16BQ9H3Z7 469 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 PDE11AQ9HCR9 933 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 SLC8A2Q9UPR5 921 aa5.09□□□□□ -1.59
SMCHD1-204ENST00000581226 COL3A1P02461 1466 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 UGDHO60701 494 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 FAM155BO75949 473 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 CYP21A2P08686 494 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 ADD2P35612 726 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 AARSP49588 968 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 PDCLQ13371 301 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 KLF9Q13886 244 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 TAF5Q15542 800 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 GPR162Q16538 588 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 PAPD7Q5XG87 772 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 RFX8Q6ZV50 586 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 MOGAT3Q86VF5 341 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 OR52N4Q8NGI2 321 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 SLC2A12Q8TD20 617 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 MORC4Q8TE76 937 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 ARRDC3Q96B67 414 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 TMLHEQ9NVH6 421 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 TMEM45AQ9NWC5 275 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 TRNAU1APQ9NX07 287 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 TUBA8Q9NY65 449 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 MTMR4Q9NYA4 1195 aa5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 ZNF70Q9UC06 446 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-204ENST00000581226 FAM90A20PA6NIJ5 464 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 HNRNPRO43390 633 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 TLR2O60603 784 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 CYP19A1P11511 503 aaPredicted RBP5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 ZNF81P51508 661 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 RBM5P52756 815 aaKnown RBP eCLIP5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 ADPRHP54922 357 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 B4GALNT1Q00973 533 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 DCTN1Q14203 1278 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 ETFDHQ16134 617 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 ADCK5Q3MIX3 580 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 LRRC24Q50LG9 513 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 C10orf25Q5T742 122 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 PXDC1Q5TGL8 231 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 ANKRD45Q5TZF3 282 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 SHC4Q6S5L8 630 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 ZNF793Q6ZN11 406 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 DEF8Q6ZN54 512 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 ANKRD13BQ86YJ7 626 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 SUGP1Q8IWZ8 645 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 NANOGP1Q8N7R0 232 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 EXD3Q8N9H8 876 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 FSIP1Q8NA03 581 aa5.07□□□□□ -1.6
SMCHD1-204ENST00000581226 AFG1LQ8WV93 481 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms