RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 SHROOM1Q2M3G4 852 aaPredicted RBP4.27□□□□□ -1.73
SMG8-205ENST00000580798 PROSER3Q2NL68 480 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 FLYWCH1Q4VC44 716 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 CEP55Q53EZ4 464 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 KRBOX4Q5JUW0 171 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 DGKKQ5KSL6 1271 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 LIN54Q6MZP7 749 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 PGBD2Q6P3X8 592 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 KLC3Q6P597 504 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 SHQ1Q6PI26 577 aaKnown RBP4.27□□□□□ -1.73
SMG8-205ENST00000580798 RGS9BPQ6ZS82 235 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 IKBIPQ70UQ0 350 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 TUBA1AQ71U36 451 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 DPP9Q86TI2 863 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 ADGRG5Q8IZF4 528 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 OR2C3Q8N628 320 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 PCSK9Q8NBP7 692 aaKnown RBP4.27□□□□□ -1.73
SMG8-205ENST00000580798 BBOF1Q8ND07 529 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 IPMKQ8NFU5 416 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 GOT1L1Q8NHS2 421 aaPredicted RBP4.27□□□□□ -1.73
SMG8-205ENST00000580798 MYCBPAPQ8TBZ2 947 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 FAM216AQ8WUB2 273 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 TRAPPC12Q8WVT3 735 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 HPS3Q969F9 1004 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 GIMAP5Q96F15 307 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 C8orf76Q96K31 380 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 KLHL32Q96NJ5 620 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 YME1L1Q96TA2 773 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 TBCBQ99426 244 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 TNMDQ9H2S6 317 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 VCPKMTQ9H867 229 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 CERS4Q9HA82 394 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 PLSCR4Q9NRQ2 329 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 TDP1Q9NUW8 608 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 PPP1R14DQ9NXH3 145 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 MCM9Q9NXL9 1143 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 FNIP2Q9P278 1114 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 SUCLA2Q9P2R7 463 aaPredicted RBP4.27□□□□□ -1.73
SMG8-205ENST00000580798 SUFUQ9UMX1 484 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 BTBD3Q9Y2F9 522 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 TMEM94Q12767 1356 aa4.27□□□□□ -1.73
SMG8-205ENST00000580798 ABCC9O60706 1549 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 KRT87PA6NCN2 255 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 LINC01548A6NM66 108 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 LACTBL1A8MY62 500 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 GOLGA6L19H0YKK7 550 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 RIPK2O43353 540 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 RTN2O75298 545 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 OFD1O75665 1012 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 SUN1O94901 812 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 ADCY5O95622 1261 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 HEXBP07686 556 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 CHRM2P08172 466 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 PCP11498 1178 aaKnown RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 TMEM11P17152 192 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 KELP23276 732 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 MCM5P33992 734 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 NF2P35240 595 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 HSD17B2P37059 387 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 TECP42680 631 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 MTIF2P46199 727 aaKnown RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 CCT4P50991 539 aaKnown RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 ANXA11P50995 505 aaKnown RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 ARL4CP56559 192 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 NLRP5P59047 1200 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 RELQ04864 619 aaPredicted RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 ZNF844Q08AG5 666 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 GALNT1Q10472 559 aaPredicted RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 TFCP2Q12800 502 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 SLC10A2Q12908 348 aaPredicted RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 KRT32Q14532 448 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 KCNB1Q14721 858 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 NAA25Q14CX7 972 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 WDR43Q15061 677 aaKnown RBP eCLIP4.26□□□□□ -1.73
SMG8-205ENST00000580798 TXNRD1Q16881 649 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 PABPC1LQ4VXU2 614 aaKnown RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 ZNF782Q6ZMW2 699 aaPredicted RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 MIGA2Q7L4E1 593 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 DGLUCYQ7Z3D6 616 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 TECPR1Q7Z6L1 1165 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 RSPH3Q86UC2 560 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 SPATA24Q86W54 205 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 SPATA2LQ8IUW3 424 aaPredicted RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 EFCAB13Q8IY85 973 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 CCDC33Q8N5R6 958 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 NSUN7Q8NE18 718 aaKnown RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 ZMIZ2Q8NF64 920 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 SEMA6DQ8NFY4 1073 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 TRIM58Q8NG06 486 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 MOSPD2Q8NHP6 518 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 IFI44Q8TCB0 444 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 MIPOL1Q8TD10 442 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 DHX58Q96C10 678 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 RIPOR3Q96MK2 946 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 DDX23Q9BUQ8 820 aaKnown RBP4.26□□□□□ -1.73
SMG8-205ENST00000580798 STK31Q9BXU1 1019 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 PACSIN1Q9BY11 444 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 ZCWPW1Q9H0M4 648 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 VPS45Q9NRW7 570 aa4.26□□□□□ -1.73
SMG8-205ENST00000580798 ADPRHL2Q9NX46 363 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms