RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 APEX2Q9UBZ4 518 aa20.2■□□□□ 0.82
LIMD2-209ENST00000580222 SPTA1P02549 2419 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 TEX51A0A1B0GUA7 166 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 RRP8O43159 456 aaKnown RBP20.19■□□□□ 0.82
LIMD2-209ENST00000580222 AP1G2O75843 785 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 ACADMP11310 421 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 CD58P19256 250 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 GRIA4P48058 902 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 KLK7P49862 253 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 YWHAEP62258 255 aaKnown RBP20.19■□□□□ 0.82
LIMD2-209ENST00000580222 APBA1Q02410 837 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 SHBQ15464 509 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 C6orf118Q5T5N4 469 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 RRAGAQ7L523 313 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 ARID3AQ99856 593 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 XPO4Q9C0E2 1151 aaKnown RBP20.19■□□□□ 0.82
LIMD2-209ENST00000580222 SIX2Q9NPC8 291 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 OSGEPQ9NPF4 335 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 CYLDQ9NQC7 956 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 KRT82Q9NSB4 513 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 COMMD8Q9NX08 183 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 ELOVL2Q9NXB9 296 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 SIK3Q9Y2K2 1263 aa20.19■□□□□ 0.82
LIMD2-209ENST00000580222 COL12A1Q99715 3063 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 ENC1O14682 589 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 CAPN9O14815 690 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 CYP26A1O43174 497 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 TSPAN3O60637 253 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 CCDC130P13994 396 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 ATP5C1P36542 298 aaKnown RBP20.18■□□□□ 0.82
LIMD2-209ENST00000580222 ZNF132P52740 706 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 GCNT1Q02742 428 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 CCDC173Q0VFZ6 552 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 ORC1Q13415 861 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 NR1I3Q14994 352 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 TEAD4Q15561 434 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 GJB7Q6PEY0 223 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 NEK11Q8NG66 645 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 KAT5Q92993 513 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 FAM81BQ96LP2 452 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 PCED1AQ9H1Q7 454 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 UBE2TQ9NPD8 197 aaPredicted RBP20.18■□□□□ 0.82
LIMD2-209ENST00000580222 FAM207AQ9NSI2 230 aaPredicted RBP20.18■□□□□ 0.82
LIMD2-209ENST00000580222 LSM7Q9UK45 103 aaKnown RBP20.18■□□□□ 0.82
LIMD2-209ENST00000580222 PCDHGA1Q9Y5H4 931 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 NUMA1Q14980 2115 aa20.18■□□□□ 0.82
LIMD2-209ENST00000580222 A0A1B0GTQ1 180 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 A0A1W2PQC6 194 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 PAPSS1O43252 624 aaPredicted RBP20.17■□□□□ 0.82
LIMD2-209ENST00000580222 STC2O76061 302 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 EPHX1P07099 455 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 MAP3K7CLP57077 242 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 CXADRP78310 365 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 HES3Q5TGS1 186 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 FBXL19Q6PCT2 694 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 SARM1Q6SZW1 724 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 ENOSF1Q7L5Y1 443 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 FMNL3Q8IVF7 1028 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 SPACA3Q8IXA5 215 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 ZNF366Q8N895 744 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 FGF11Q92914 225 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 SMARCD1Q96GM5 515 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 NRSN2Q9GZP1 204 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 PLCB1Q9NQ66 1216 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 TLR8Q9NR97 1041 aaKnown RBP20.17■□□□□ 0.82
LIMD2-209ENST00000580222 CISHQ9NSE2 258 aa20.17■□□□□ 0.82
LIMD2-209ENST00000580222 A0A1W2PQH9 124 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 BRINP1O60477 761 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 FSBPO95073 299 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 ACADVLP49748 655 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 ARHGAP44Q17R89 818 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 KLHDC7AQ5VTJ3 777 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 ACOT1Q86TX2 421 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 TTC39CQ8N584 583 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 OR2T3Q8NH03 318 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 CNDP2Q96KP4 475 aaKnown RBP20.16■□□□□ 0.82
LIMD2-209ENST00000580222 TRIM5Q9C035 493 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 GANQ9H2C0 597 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 CSNK1G1Q9HCP0 422 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 DNAJC12Q9UKB3 198 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 FHOD1Q9Y613 1164 aa20.16■□□□□ 0.82
LIMD2-209ENST00000580222 HHLA1C9JL84 531 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 NPC1O15118 1278 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 ARHGAP6O43182 974 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 RFPL3O75679 317 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 LDOC1O95751 146 aaPredicted RBP20.15■□□□□ 0.82
LIMD2-209ENST00000580222 SEMA4FO95754 770 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 WNT1P04628 370 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 RARGP13631 454 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 KRT10P13645 584 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 UCHL3P15374 230 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 TRIM21P19474 475 aaKnown RBP20.15■□□□□ 0.82
LIMD2-209ENST00000580222 CD27P26842 260 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 HNF1BP35680 557 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 NDST1P52848 882 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 INCA1Q0VD86 236 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 CAMK2GQ13555 558 aaPredicted RBP20.15■□□□□ 0.82
LIMD2-209ENST00000580222 RAPGEF1Q13905 1077 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 SCD5Q86SK9 330 aa20.15■□□□□ 0.82
LIMD2-209ENST00000580222 UNC93AQ86WB7 457 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms