RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 LRRC4Q9HBW1 653 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 KRT82Q9NSB4 513 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 FLRT1Q9NZU1 646 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 ZNF180Q9UJW8 692 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 DNAJC16Q9Y2G8 782 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 HBS1LQ9Y450 684 aaKnown RBP10.78□□□□□ -0.68
TOP3A-209ENST00000580095 IPPQ9Y573 584 aa10.78□□□□□ -0.68
TOP3A-209ENST00000580095 COL1A2P08123 1366 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 SDR42E2A6NKP2 422 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 CAPN9O14815 690 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 ATP9BO43861 1147 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 SORBS2O94875 1100 aaKnown RBP10.77□□□□□ -0.69
TOP3A-209ENST00000580095 MYL3P08590 195 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 USP17L7P0C7H9 530 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 MXRA7P84157 204 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 DEUP1Q05D60 604 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 LDLRAD1Q5T700 205 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 RASSF3Q86WH2 238 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 NT5DC4Q86YG4 428 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 CRLF3Q8IUI8 442 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 C10orf107Q8IVU9 208 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 SIX6OS1Q8N1H7 587 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 CRYBG2Q8N1P7 616 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 SMC1BQ8NDV3 1235 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 ACVR1CQ8NER5 493 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 CELF6Q96J87 481 aaKnown RBP10.77□□□□□ -0.69
TOP3A-209ENST00000580095 SLX1AQ9BQ83 275 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 PAAF1Q9BRP4 392 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 THTPAQ9BU02 230 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 ULBP1Q9BZM6 244 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 UNKQ9C0B0 810 aaKnown RBP10.77□□□□□ -0.69
TOP3A-209ENST00000580095 XAB2Q9HCS7 855 aaKnown RBP10.77□□□□□ -0.69
TOP3A-209ENST00000580095 PNPOQ9NVS9 261 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 KLHL8Q9P2G9 620 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-209ENST00000580095 RBM47A0AV96 593 aaKnown RBP10.77□□□□□ -0.69
TOP3A-209ENST00000580095 EEF2KO00418 725 aaKnown RBP10.77□□□□□ -0.69
TOP3A-209ENST00000580095 ZMPSTE24O75844 475 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 TGDSO95455 350 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 CTSHP09668 335 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 TPSB2P20231 275 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 IFRD2Q12894 506 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-209ENST00000580095 TPSAB1Q15661 275 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 EML3Q32P44 896 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 UBXN11Q5T124 520 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 ATG16L1Q676U5 607 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 NPWQ8N729 165 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 EMID1Q96A84 441 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-209ENST00000580095 PTPN18Q99952 460 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 ABHD16BQ9H3Z7 469 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 TLE6Q9H808 572 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 MAN1C1Q9NR34 630 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 TMEM216Q9P0N5 145 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 ZFATQ9P243 1243 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 BLOC1S6Q9UL45 172 aa10.77□□□□□ -0.69
TOP3A-209ENST00000580095 MYBPHLA2RUH7 354 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 TBX10O75333 385 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 WFS1O76024 890 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 FYNP06241 537 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 ITGA2BP08514 1039 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 CD1EP15812 388 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 PTPN1P18031 435 aaKnown RBP10.76□□□□□ -0.69
TOP3A-209ENST00000580095 CRHR1P34998 444 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 CCNFP41002 786 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 CD151P48509 253 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 NR2C2P49116 596 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 CERCAMQ5T4B2 595 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 DPY19L2Q6NUT2 758 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 CLEC20AQ6ZU45 233 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 KDELC2Q7Z4H8 507 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 ZDHHC17Q8IUH5 632 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 PLD6Q8N2A8 252 aaKnown RBP10.76□□□□□ -0.69
TOP3A-209ENST00000580095 DNAAF3Q8N9W5 541 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 SMG8Q8ND04 991 aaKnown RBP10.76□□□□□ -0.69
TOP3A-209ENST00000580095 USP33Q8TEY7 942 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 HASPINQ8TF76 798 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 MFSD3Q96ES6 412 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 CHCHD3Q9NX63 227 aaKnown RBP10.76□□□□□ -0.69
TOP3A-209ENST00000580095 G3BP2Q9UN86 482 aaKnown RBP10.76□□□□□ -0.69
TOP3A-209ENST00000580095 PTGESO14684 152 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 C6orf222P0C671 652 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-209ENST00000580095 NCAM1P13591 858 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 ZFXP17010 805 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-209ENST00000580095 NPR3P17342 541 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 ERCC2P18074 760 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 TYK2P29597 1187 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 PEX19P40855 299 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 SNX16P57768 344 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 SLC25A3Q00325 362 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 IRF9Q00978 393 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 MFSD10Q14728 455 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 MUM1Q2TAK8 710 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 HSP90AA5PQ58FG0 334 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 EFHC1Q5JVL4 640 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 WASHC2DQ5SRD0 308 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 TLK2Q86UE8 772 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 ZNF669Q96BR6 464 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-209ENST00000580095 LRRC39Q96DD0 335 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 C7orf26Q96N11 449 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 DUSP16Q9BY84 665 aa10.76□□□□□ -0.69
TOP3A-209ENST00000580095 FRMD8Q9BZ67 464 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms