RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 A0A1B0GVT2 93 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 E9PAM4 449 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 O00370 1275 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 TNFSF14O43557 240 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 TSPAN3O60637 253 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 FSBPO95073 299 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 CDK4P11802 303 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 HLA-EP13747 358 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 ZNF18P17022 549 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 C21orf59P57076 290 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 DAOAP59103 153 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 APBA1Q02410 837 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 NNTQ13423 1086 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 CDH18Q13634 790 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 COL9A2Q14055 689 aaPredicted RBP13.88□□□□□ -0.19
TRAF4-214ENST00000580073 KCNJ12Q14500 433 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 TPD52L1Q16890 204 aaPredicted RBP13.88□□□□□ -0.19
TRAF4-214ENST00000580073 TMEM215Q68D42 235 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 DPY19L2P1Q6NXN4 242 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 LCLAT1Q6UWP7 414 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 BHLHA9Q7RTU4 235 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 TMPRSS7Q7RTY8 843 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 APTXQ7Z2E3 356 aaKnown RBP13.88□□□□□ -0.19
TRAF4-214ENST00000580073 KIAA0907Q7Z7F0 614 aaPredicted RBP13.88□□□□□ -0.19
TRAF4-214ENST00000580073 CREBRFQ8IUR6 639 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 KDM1BQ8NB78 822 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 C1orf216Q8TAB5 229 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 CYB5D2Q8WUJ1 264 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 EDEM1Q92611 657 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 AZIN2Q96A70 460 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 P2RY11Q96G91 374 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 BPIFA3Q9BQP9 254 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 IL21RQ9HBE5 538 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 CBX8Q9HC52 389 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 TM9SF3Q9HD45 589 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 CLEC4EQ9ULY5 219 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 ANKRD6Q9Y2G4 727 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 GPSM3Q9Y4H4 160 aa13.88□□□□□ -0.19
TRAF4-214ENST00000580073 LRRC72A6NJI9 287 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 YJEFN3A6XGL0 299 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 E7ENQ6 273 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 M0QYV0 167 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 PMM2O15305 246 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 PAPSS1O43252 624 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-214ENST00000580073 MSI1O43347 362 aaKnown RBP13.87□□□□□ -0.19
TRAF4-214ENST00000580073 TBL1XO60907 577 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 FGFR1OPO95684 399 aaKnown RBP13.87□□□□□ -0.19
TRAF4-214ENST00000580073 IGLV3-27P01718 113 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 AFPP02771 609 aaKnown RBP13.87□□□□□ -0.19
TRAF4-214ENST00000580073 LTFP02788 710 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 ATP1A3P13637 1013 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 LCP1P13796 627 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 ACSL1P33121 698 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 CSNK1EP49674 416 aaKnown RBP13.87□□□□□ -0.19
TRAF4-214ENST00000580073 TBX4P57082 545 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 RPS14P62263 151 aaKnown RBP13.87□□□□□ -0.19
TRAF4-214ENST00000580073 MYL5Q02045 173 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 SLC45A4Q5BKX6 768 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 TCP11X2Q5H9J9 407 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 RNF219Q5W0B1 726 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-214ENST00000580073 DBX2Q6ZNG2 339 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 ADIPOR2Q86V24 386 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 PNPLA1Q8N8W4 532 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 GANCQ8TET4 914 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 HSFY1Q96LI6 401 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 SCUBE2Q9NQ36 999 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 PRSS16Q9NQE7 514 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 TAB2Q9NYJ8 693 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 FTSJ1Q9UET6 329 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 FZD4Q9ULV1 537 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAF4-214ENST00000580073 ZZEF1O43149 2961 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 GOLGA4Q13439 2230 aaKnown RBP13.87□□□□□ -0.19
TRAF4-214ENST00000580073 BAHCC1Q9P281 2608 aa13.87□□□□□ -0.19
TRAF4-214ENST00000580073 MYLKQ15746 1914 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 TAF4O00268 1085 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 TULP2O00295 520 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 ACSL4O60488 711 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 APOEP02649 317 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 SRPRAP08240 638 aaKnown RBP13.86□□□□□ -0.19
TRAF4-214ENST00000580073 HNF1BP35680 557 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 MTIF2P46199 727 aaKnown RBP13.86□□□□□ -0.19
TRAF4-214ENST00000580073 ZNF165P49910 485 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 RACK1P63244 317 aaKnown RBP13.86□□□□□ -0.19
TRAF4-214ENST00000580073 LRMPQ12912 555 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 KRT31Q15323 416 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 PTPRNQ16849 979 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 KIF19Q2TAC6 998 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 PIK3R6Q5UE93 754 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 KIAA0895LQ68EN5 471 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 TMEM270Q6UE05 265 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 ARHGEF19Q8IW93 802 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 EHBP1Q8NDI1 1231 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 UBA3Q8TBC4 463 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 KAT5Q92993 513 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 BIRC7Q96CA5 298 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 TUBGCP2Q9BSJ2 902 aa13.86□□□□□ -0.19
TRAF4-214ENST00000580073 RSPH9Q9H1X1 276 aaPredicted RBP13.86□□□□□ -0.19
TRAF4-214ENST00000580073 PABPC3Q9H361 631 aaKnown RBP13.86□□□□□ -0.19
TRAF4-214ENST00000580073 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms