RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 YWHAZP63104 245 aaKnown RBP10.96□□□□□ -0.66
SEC22B-201ENST00000578049 C10orf120Q5SQS8 335 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 ZNF618Q5T7W0 954 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 MARC1Q5VT66 337 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 SSU72Q9NP77 194 aaKnown RBP10.96□□□□□ -0.66
SEC22B-201ENST00000578049 CACNA2D2Q9NY47 1150 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 SFMBT1Q9UHJ3 866 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 CCDC154A6NI56 674 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 LIASO43766 372 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 PABPC1P11940 636 aaKnown RBP10.95□□□□□ -0.66
SEC22B-201ENST00000578049 OXCT1P55809 520 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 FBXW4P57775 412 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 CACNB2Q08289 660 aaPredicted RBP10.95□□□□□ -0.66
SEC22B-201ENST00000578049 POU5F2Q8N7G0 328 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 TRMOQ9BU70 441 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 GRIP2Q9C0E4 1043 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 DUSP12Q9UNI6 340 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 SIGLEC16A6NMB1 481 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 TGDSO95455 350 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 CCNA2P20248 432 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 KDELR1P24390 212 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 ATP5F1P24539 256 aaPredicted RBP10.95□□□□□ -0.66
SEC22B-201ENST00000578049 RXRBP28702 533 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 CASP7P55210 303 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 ADCK2Q7Z695 626 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 RAP2CQ9Y3L5 183 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 SYNDIG1LA6NDD5 238 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 H3BMM5 538 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 PIGNO95427 931 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 OAZ1P54368 228 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 PPIL2Q13356 520 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 OTOP1Q7RTM1 612 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 TMEM132CQ8N3T6 1108 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 EMC1Q8N766 993 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 OR7A2PQ8NGA2 310 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 BORCS5Q969J3 196 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 LENG1Q96BZ8 264 aaPredicted RBP10.95□□□□□ -0.66
SEC22B-201ENST00000578049 RNF145Q96MT1 663 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 SERHL2Q9H4I8 314 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 COPS7BQ9H9Q2 264 aaPredicted RBP10.95□□□□□ -0.66
SEC22B-201ENST00000578049 SPAG4Q9NPE6 437 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 SERHLQ9NQF3 203 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 A0A0A0MRY4 1105 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 SLITRK3O94933 977 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 COX4I1P13073 169 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 AVPR1AP37288 418 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 DLG4P78352 724 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 NEDD8Q15843 81 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 ADGRF2Q8IZF7 708 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 SPATA13Q96N96 652 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 PARK7Q99497 189 aaKnown RBP10.95□□□□□ -0.66
SEC22B-201ENST00000578049 ITM2BQ9Y287 266 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 CCNG1P51959 295 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 MRPS22P82650 360 aaKnown RBP10.95□□□□□ -0.66
SEC22B-201ENST00000578049 METTL21CQ5VZV1 264 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 SDE2Q6IQ49 451 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 CASP12Q6UXS9 341 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 PHF13Q86YI8 300 aaPredicted RBP10.95□□□□□ -0.66
SEC22B-201ENST00000578049 STK40Q8N2I9 435 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 PPP1R14BQ96C90 147 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 MBD2Q9UBB5 411 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 KLHL20Q9Y2M5 609 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 SPIRE1Q08AE8 756 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 BST1Q10588 318 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 SNAPC2Q13487 334 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 DPYSQ14117 519 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 FAM187BQ17R55 369 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 KLHL12Q53G59 568 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 FBXO47Q5MNV8 452 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 METTL7BQ6UX53 244 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 ILDR2Q71H61 639 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 GORASP1Q9BQQ3 440 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 CYLDQ9NQC7 956 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 HPS4Q9NQG7 708 aa10.95□□□□□ -0.66
SEC22B-201ENST00000578049 RBM22Q9NW64 420 aaKnown RBP eCLIP10.95□□□□□ -0.66
SEC22B-201ENST00000578049 MTF2Q9Y483 593 aaPredicted RBP10.95□□□□□ -0.66
SEC22B-201ENST00000578049 MYBL2P10244 700 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 BMP6P22004 513 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 MIPP30301 263 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 SLC12A3P55017 1021 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 SLC6A3Q01959 620 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 INTS11Q5TA45 600 aaKnown RBP10.94□□□□□ -0.66
SEC22B-201ENST00000578049 ZBED2Q9BTP6 218 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 GPATCH2LQ9NWQ4 482 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 SH3BP1Q9Y3L3 701 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 DYNC1LI2O43237 492 aaPredicted RBP10.94□□□□□ -0.66
SEC22B-201ENST00000578049 SYNCRIPO60506 623 aaKnown RBP10.94□□□□□ -0.66
SEC22B-201ENST00000578049 MAGEC1O60732 1142 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 LCA5LO95447 670 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 VIL1P09327 827 aaKnown RBP10.94□□□□□ -0.66
SEC22B-201ENST00000578049 ZNF7P17097 686 aaPredicted RBP10.94□□□□□ -0.66
SEC22B-201ENST00000578049 LRPAP1P30533 357 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 CCR1P32246 355 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 IFNGR2P38484 337 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 OTUD3Q5T2D3 398 aaPredicted RBP10.94□□□□□ -0.66
SEC22B-201ENST00000578049 MZT2BQ6NZ67 158 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 CDC73Q6P1J9 531 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 MCRS1Q96EZ8 462 aa10.94□□□□□ -0.66
SEC22B-201ENST00000578049 WDR12Q9GZL7 423 aaKnown RBP10.94□□□□□ -0.66
SEC22B-201ENST00000578049 MEI4A8MW99 385 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms