RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 KIAA1257Q9ULG3 409 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 AP4B1Q9Y6B7 739 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 SLIT3O75094 1523 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 AKAP12Q02952 1782 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 CD4P01730 458 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 PGAM1P18669 254 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 CCNFP41002 786 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 GRIA3P42263 894 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 MAPK11Q15759 364 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 ADGRD1Q6QNK2 874 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 TSHZ1Q6ZSZ6 1077 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 C12orf50Q8NA57 414 aaPredicted RBP18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 ZNF516Q92618 1163 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 NT5MQ9NPB1 228 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 HPS4Q9NQG7 708 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 ZNF358Q9NW07 568 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 PRG3Q9Y2Y8 225 aaPredicted RBP18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 IGKV6D-41A0A0C4DH26 115 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 APOA4P06727 396 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 CYP2C8P10632 490 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 CPB1P15086 417 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 GSSP48637 474 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 JAG1P78504 1218 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 ZIK1Q3SY52 487 aaPredicted RBP18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 MSS51Q4VC12 460 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 ADGRF2Q8IZF7 708 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 URGCPQ8TCY9 931 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 AZIN2Q96A70 460 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 NPAS2Q99743 824 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 CDT1Q9H211 546 aa18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 MMADHCQ9H3L0 296 aaPredicted RBP18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 ABI2Q9NYB9 513 aaPredicted RBP18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 UBQLN1Q9UMX0 589 aaKnown RBP18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 HBS1LQ9Y450 684 aaKnown RBP18.27■□□□□ 0.51
ATPAF1-214ENST00000576409 MYPNQ86TC9 1320 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 YDJCA8MPS7 323 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 XPAP23025 273 aaPredicted RBP18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 TWF1Q12792 350 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 NOTUMQ6P988 496 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 BNIPLQ7Z465 357 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 SPATA2LQ8IUW3 424 aaPredicted RBP18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 C12orf56Q8IXR9 622 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 FBXW8Q8N3Y1 598 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 NKD2Q969F2 451 aaPredicted RBP18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 ACE2Q9BYF1 805 aaPredicted RBP18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 EBF3Q9H4W6 596 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 ATP8B3O60423 1300 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 C9JVG2 144 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 AGRPO00253 132 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 TM7SF2O76062 418 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 VAV1P15498 845 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 GRIA4P48058 902 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 CLK1P49759 484 aaKnown RBP18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 SCIMPQ6UWF3 145 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 TBCBQ99426 244 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 CROTQ9UKG9 612 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 MYH7P12883 1935 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 H3BRB1 525 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 VCLP18206 1134 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 GRIA1P42261 906 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 HSPA13P48723 471 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 RPL14P50914 215 aaKnown RBP18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 CDH13P55290 713 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 BST2Q10589 180 aaKnown RBP18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 ACVR2BQ13705 512 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 LIN52Q52LA3 116 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 ZNF555Q8NEP9 628 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 TUT1Q9H6E5 874 aaKnown RBP18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 COG4Q9H9E3 785 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 EGFL7Q9UHF1 273 aa18.26■□□□□ 0.51
ATPAF1-214ENST00000576409 C15orf38-AP3S2A0A0A6YYH1 394 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 GALK1P51570 392 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 ARPINQ7Z6K5 226 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 FAM228AQ86W67 206 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 DHFR2Q86XF0 187 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 SLC4A5Q9BY07 1137 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 EXOSC4Q9NPD3 245 aaKnown RBP18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 SYBUQ9NX95 663 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 SCHIP1Q9P0W5 487 aaPredicted RBP18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 A0A0A0MRY4 1105 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 YBX3P16989 372 aaKnown RBP eCLIP18.25■□□□□ 0.515e-6■■■□□ 19.1
ATPAF1-214ENST00000576409 CCDC15Q0P6D6 951 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 LAMC2Q13753 1193 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 SLC41A1Q8IVJ1 513 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 SPATA13Q96N96 652 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 GORASP1Q9BQQ3 440 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 RERGLQ9H628 205 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 XPNPEP1Q9NQW7 623 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 SLC7A8Q9UHI5 535 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 H0Y626 953 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 ANXA9O76027 345 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 TRIM16O95361 564 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 MPSTP25325 297 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 UBE3AQ05086 875 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 CYP51A1Q16850 503 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 ZRANB3Q5FWF4 1079 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 PACS1Q6VY07 963 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 ZDHHC14Q8IZN3 488 aa18.25■□□□□ 0.51
ATPAF1-214ENST00000576409 TMCO5AQ8N6Q1 288 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms