RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 YJEFN3A6XGL0 299 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 E7ENQ6 273 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 LATS1O95835 1130 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 KRT13P13646 458 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 GLDCP23378 1020 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 NR2F2P24468 414 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 SLC6A4P31645 630 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 CSKP41240 450 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 ME1P48163 572 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 HNRNPA1L2Q32P51 320 aaKnown RBP18.21■□□□□ 0.51
CCDC40-211ENST00000574099 PIK3R6Q5UE93 754 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 RESP18Q5W5W9 173 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 ARHGAP17Q68EM7 881 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 INTS8Q75QN2 995 aaKnown RBP18.21■□□□□ 0.51
CCDC40-211ENST00000574099 SPACA3Q8IXA5 215 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 FAM186BQ8IYM0 893 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 NAF1Q96HR8 494 aaKnown RBP18.21■□□□□ 0.51
CCDC40-211ENST00000574099 TSPAN16Q9UKR8 245 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 PCDHA7Q9UN72 937 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 CLCA2Q9UQC9 943 aa18.21■□□□□ 0.51
CCDC40-211ENST00000574099 XPO1O14980 1071 aaKnown RBP18.2■□□□□ 0.5
CCDC40-211ENST00000574099 SLFN14P0C7P3 912 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 SLC8A1P32418 973 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 ACTN2P35609 894 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 NXPH1P58417 271 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 PPP2CBP62714 309 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 PPP2CAP67775 309 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 TAF1BQ53T94 588 aaPredicted RBP18.2■□□□□ 0.5
CCDC40-211ENST00000574099 KDM7AQ6ZMT4 941 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 ERICH1Q86X53 443 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 SIX6OS1Q8N1H7 587 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 AADATQ8N5Z0 425 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 OR14C36Q8NHC7 312 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 PAGE5Q96GU1 130 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 MRGPRX3Q96LB0 322 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 PRICKLE1Q96MT3 831 aaPredicted RBP18.2■□□□□ 0.5
CCDC40-211ENST00000574099 LGMNQ99538 433 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 TMEM8AQ9HCN3 771 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 INTS6Q9UL03 887 aaKnown RBP18.2■□□□□ 0.5
CCDC40-211ENST00000574099 MGAQ8IWI9 3026 aa18.2■□□□□ 0.5
CCDC40-211ENST00000574099 ATMQ13315 3056 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 CYSRT1A8MQ03 144 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 TTC34A8MYJ7 566 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 J3QKU1 62 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 TLR4O00206 839 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 MAPK13O15264 365 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 ACTN4O43707 911 aaKnown RBP18.19■□□□□ 0.5
CCDC40-211ENST00000574099 SDC3O75056 442 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 CTSOP43234 321 aaPredicted RBP18.19■□□□□ 0.5
CCDC40-211ENST00000574099 ADPRHP54922 357 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 INSM1Q01101 510 aaPredicted RBP18.19■□□□□ 0.5
CCDC40-211ENST00000574099 SFSWAPQ12872 951 aaKnown RBP18.19■□□□□ 0.5
CCDC40-211ENST00000574099 TBC1D25Q3MII6 688 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 FAM133BQ5BKY9 247 aaKnown RBP18.19■□□□□ 0.5
CCDC40-211ENST00000574099 C9orf64Q5T6V5 341 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 SFMBT2Q5VUG0 894 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 MMS22LQ6ZRQ5 1243 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 CARNMT1Q8N4J0 409 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 UBA3Q8TBC4 463 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 TTC17Q96AE7 1141 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 MYEOVQ96EZ4 313 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 INTS4Q96HW7 963 aaKnown RBP18.19■□□□□ 0.5
CCDC40-211ENST00000574099 LMLNQ96KR4 655 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 ADAMTS1Q9UHI8 967 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 FZD4Q9ULV1 537 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 MAPK8IP1Q9UQF2 711 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 TRAF3IP3Q9Y228 551 aa18.19■□□□□ 0.5
CCDC40-211ENST00000574099 PIK3R2O00459 728 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 LCP1P13796 627 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 CKMT2P17540 419 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 SLC11A2P49281 568 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 NUMBP49757 651 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 CCR5P51681 352 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 RPS24P62847 133 aaKnown RBP18.18■□□□□ 0.5
CCDC40-211ENST00000574099 BST2Q10589 180 aaKnown RBP18.18■□□□□ 0.5
CCDC40-211ENST00000574099 KCNH2Q12809 1159 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 ILKQ13418 452 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 SLC45A4Q5BKX6 768 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 MPP7Q5T2T1 576 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 KRT39Q6A163 491 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 SND1Q7KZF4 910 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCDC40-211ENST00000574099 SPATS2Q86XZ4 545 aaKnown RBP18.18■□□□□ 0.5
CCDC40-211ENST00000574099 HJURPQ8NCD3 748 aaPredicted RBP18.18■□□□□ 0.5
CCDC40-211ENST00000574099 ABCC13Q9NSE7 274 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 HESX1Q9UBX0 185 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 ERVW-1Q9UQF0 538 aa18.18■□□□□ 0.5
CCDC40-211ENST00000574099 ARID1BQ8NFD5 2236 aaPredicted RBP18.17■□□□□ 0.5
CCDC40-211ENST00000574099 PYCARD-AS1I3L0S3 204 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 ACSL4O60488 711 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 ASLP04424 464 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 CD19P15391 556 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 MXI1P50539 228 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 CDH18Q13634 790 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 PITRM1Q5JRX3 1037 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 NADSYN1Q6IA69 706 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 KANSL1Q7Z3B3 1105 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 STK40Q8N2I9 435 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 OXR1Q8N573 874 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 TTC39CQ8N584 583 aa18.17■□□□□ 0.5
CCDC40-211ENST00000574099 FIBINQ8TAL6 211 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms