RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CUL3Q13618 768 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 CNPY1Q3B7I2 92 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 PLD6Q8N2A8 252 aaKnown RBP19.56■□□□□ 0.72
SCARF1-206ENST00000573852 P2RY11Q96G91 374 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 ZNF638Q14966 1978 aaKnown RBP19.56■□□□□ 0.72
SCARF1-206ENST00000573852 HACD1B0YJ81 288 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 CCDC130P13994 396 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 DEUP1Q05D60 604 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 NAB1Q13506 487 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 GJC2Q5T442 439 aaPredicted RBP19.56■□□□□ 0.72
SCARF1-206ENST00000573852 RASIP1Q5U651 963 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 FAM131BQ86XD5 332 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 LINC01465Q8N7H1 131 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 OR6B3Q8NGW1 331 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 ZMAT2Q96NC0 199 aaKnown RBP19.56■□□□□ 0.72
SCARF1-206ENST00000573852 FCRL3Q96P31 734 aaPredicted RBP19.56■□□□□ 0.72
SCARF1-206ENST00000573852 TMPRSS4Q9NRS4 437 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 SNX15Q9NRS6 342 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 SEPT10Q9P0V9 454 aa19.56■□□□□ 0.72
SCARF1-206ENST00000573852 SF3B1O75533 1304 aaKnown RBP eCLIP19.55■□□□□ 0.722e-14■■■■■ 172.3
SCARF1-206ENST00000573852 ADORA2BP29275 332 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 KYAT1Q16773 422 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 LIN52Q52LA3 116 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 NAPRTQ6XQN6 538 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 PGBD4Q96DM1 585 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 SPATA16Q9BXB7 569 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 FAM96AQ9H5X1 160 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 COG4Q9H9E3 785 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 EIF2B3Q9NR50 452 aaKnown RBP19.55■□□□□ 0.72
SCARF1-206ENST00000573852 ZSWIM8A7E2V4 1837 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 FZD9O00144 591 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 UQCRBP14927 111 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 CD1EP15812 388 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 GTF2A2P52657 109 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 SNX16P57768 344 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 TBL3Q12788 808 aaKnown RBP19.55■□□□□ 0.72
SCARF1-206ENST00000573852 DLG1Q12959 904 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 ZNF484Q5JVG2 852 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 HACE1Q8IYU2 909 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 FBXW8Q8N3Y1 598 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 DCLK2Q8N568 766 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 ZNF781Q8N8C0 355 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 JADE3Q92613 823 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 ATXN7L3BQ96GX2 97 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 MPHOSPH6Q99547 160 aaKnown RBP19.55■□□□□ 0.72
SCARF1-206ENST00000573852 CCDC28BQ9BUN5 200 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 TXNDC16Q9P2K2 825 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 TBC1D30Q9Y2I9 924 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 RPS6KL1Q9Y6S9 549 aa19.55■□□□□ 0.72
SCARF1-206ENST00000573852 COX4I1P13073 169 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 RAG1P15918 1043 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 MX2P20592 715 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 SERPINB6P35237 376 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 GP5P40197 560 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 ARL4AP40617 200 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 MED21Q13503 144 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 SLC9B1Q4ZJI4 515 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 EGFL6Q8IUX8 553 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 NLRP7Q8WX94 980 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 CERS2Q96G23 380 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 TXNRD2Q9NNW7 524 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 RNF19AQ9NV58 838 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 TUBGCP4Q9UGJ1 667 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 PAPPA2Q9BXP8 1791 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 E9PBE3 544 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 H3BNX3 289 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 KLHL41O60662 606 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 OPHN1O60890 802 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 VCLP18206 1134 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 ARHGAP17Q68EM7 881 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 NT5DC4Q86YG4 428 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 TP53INP2Q8IXH6 220 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 MAPK15Q8TD08 544 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 NDRG1Q92597 394 aaKnown RBP19.54■□□□□ 0.72
SCARF1-206ENST00000573852 CPSF2Q9P2I0 782 aaKnown RBP19.54■□□□□ 0.72
SCARF1-206ENST00000573852 FZD10Q9ULW2 581 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 PCDHB12Q9Y5F1 795 aa19.54■□□□□ 0.72
SCARF1-206ENST00000573852 POLR2AP24928 1970 aaKnown RBP19.53■□□□□ 0.72
SCARF1-206ENST00000573852 PDGFRBP09619 1106 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 TRIP10Q15642 601 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 Q3C1V9 767 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 EPGNQ6UW88 154 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 ZNF567Q8N184 647 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 NAT9Q9BTE0 207 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.53■□□□□ 0.72
SCARF1-206ENST00000573852 PLXNA1Q9UIW2 1896 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 POLBP06746 335 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 KLF10Q13118 480 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 ZNF772Q68DY9 489 aaPredicted RBP19.53■□□□□ 0.72
SCARF1-206ENST00000573852 KBTBD6Q86V97 674 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 ARHGAP18Q8N392 663 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 CCNYQ8ND76 341 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 C18orf25Q96B23 403 aaPredicted RBP19.53■□□□□ 0.72
SCARF1-206ENST00000573852 CPNE1Q99829 537 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 CDH19Q9H159 772 aa19.53■□□□□ 0.72
SCARF1-206ENST00000573852 DNAJC25-GNG10A0A024R161 153 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 LGALS2P05162 132 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 GRIA2P42262 883 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 MAGEA12P43365 314 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 MTTPP55157 894 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms