RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 USP39Q53GS9 565 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 TRIM61Q5EBN2 209 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 ISM2Q6H9L7 571 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 GRAMD4Q6IC98 578 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 DDX42Q86XP3 938 aaKnown RBP eCLIP9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 ZNF366Q8N895 744 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 TMEM174Q8WUU8 243 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 NT5C1AQ9BXI3 368 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 DOCK9Q9BZ29 2069 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 SUV39H2Q9H5I1 410 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 CELSR3Q9NYQ7 3312 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 RASAL2Q9UJF2 1139 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 FRMD4BQ9Y2L6 1034 aa9.69□□□□□ -0.86
NPLOC4-210ENST00000572824 PLXNB3Q9ULL4 1909 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 IGHV1OR15-9A0A0B4J2B8 117 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 MSI1O43347 362 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 CACNG3O60359 315 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 RHOBTB1O94844 696 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 AMPD1P23109 780 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 MAOBP27338 520 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 PRCPP42785 496 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 NUMBP49757 651 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 MXI1P50539 228 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 AP3M2P53677 418 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 ADAM9Q13443 819 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 GOLGA7BQ2TAP0 167 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 DCAF17Q5H9S7 520 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 FYB2Q5VWT5 728 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 TMEM215Q68D42 235 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 ATL3Q6DD88 541 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 HTR3DQ70Z44 454 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 PIGZQ86VD9 579 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 UNC93AQ86WB7 457 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 ZC3H3Q8IXZ2 948 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 GUF1Q8N442 669 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 TMEM102Q8N9M5 508 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 WFDC5Q8TCV5 224 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 CLEC4CQ8WTT0 213 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 TAF4BQ92750 862 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 MYEOVQ96EZ4 313 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 DUSP16Q9BY84 665 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 ULBP1Q9BZM6 244 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 TMEM8AQ9HCN3 771 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 TLR8Q9NR97 1041 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 ENAMQ9NRM1 1142 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 CISHQ9NSE2 258 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 EHD2Q9NZN4 543 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 TBC1D14Q9P2M4 693 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 DEC1Q9P2X7 70 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 WASF3Q9UPY6 502 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 LAMA5O15230 3695 aa9.68□□□□□ -0.86
NPLOC4-210ENST00000572824 CABIN1Q9Y6J0 2220 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 PTPRBP23467 1997 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 SPAARA0A1B0GVQ0 90 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 KCNJ18B7U540 433 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 M0R082 166 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 PDE2AO00408 941 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 IKBKBO14920 756 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 SMNDC1O75940 238 aaKnown RBP eCLIP9.67□□□□□ -0.863e-8■□□□□ 9.1
NPLOC4-210ENST00000572824 CFIP05156 583 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 HLA-EP13747 358 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 HOXB4P17483 251 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 ENGP17813 658 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 GNA15P30679 374 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 CORO1AP31146 461 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 ATP5C1P36542 298 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 IL12RB1P42701 662 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 TNFRSF4P43489 277 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 MFAP3P55082 362 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 RPL6Q02878 288 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 NFIL3Q16649 462 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 EOGTQ5NDL2 527 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 LYSMD4Q5XG99 296 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 C8orf86Q6ZUL3 223 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 INTS8Q75QN2 995 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 CCDC186Q7Z3E2 898 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 CHPFQ8IZ52 775 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 FMR1NBQ8N0W7 255 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 UBR7Q8N806 425 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 ZSCAN1Q8NBB4 408 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 ZNF417Q8TAU3 575 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 UBA3Q8TBC4 463 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 IPO4Q8TEX9 1081 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 TFAP2BQ92481 460 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 HEXIM2Q96MH2 286 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 HSPA12BQ96MM6 686 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 FRMD6Q96NE9 622 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 ZNF587Q96SQ5 575 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 TCF12Q99081 682 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 MKRN2Q9H000 416 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 FBXO44Q9H4M3 255 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 LIN7BQ9HAP6 207 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 TMEM9BQ9NQ34 198 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 PILRBQ9UKJ0 227 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 AGO1Q9UL18 857 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 CACNA1GO43497 2377 aa9.67□□□□□ -0.86
NPLOC4-210ENST00000572824 A0A1W2PQ27 194 aa9.66□□□□□ -0.86
NPLOC4-210ENST00000572824 A0A1W2PQ64 194 aa9.66□□□□□ -0.86
NPLOC4-210ENST00000572824 A0A1W2PQD8 194 aa9.66□□□□□ -0.86
NPLOC4-210ENST00000572824 SLC12A8A0AV02 714 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms