RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CALR3Q96L12 384 aaKnown RBP14.29□□□□□ -0.12
RPAIN-209ENST00000571558 SLC2A13Q96QE2 648 aa14.29□□□□□ -0.12
RPAIN-209ENST00000571558 SELENOOQ9BVL4 669 aa14.29□□□□□ -0.12
RPAIN-209ENST00000571558 POLR3BQ9NW08 1133 aaPredicted RBP14.29□□□□□ -0.12
RPAIN-209ENST00000571558 DUS2Q9NX74 493 aaKnown RBP14.29□□□□□ -0.12
RPAIN-209ENST00000571558 GCN1Q92616 2671 aaKnown RBP14.29□□□□□ -0.12
RPAIN-209ENST00000571558 C2CD4BA6NLJ0 364 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 PATE3B3GLJ2 98 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 HYAL3O43820 417 aaPredicted RBP14.28□□□□□ -0.12
RPAIN-209ENST00000571558 HSF2BPO75031 334 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 YWHAQP27348 245 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 NOP2P46087 812 aaKnown RBP14.28□□□□□ -0.12
RPAIN-209ENST00000571558 DHPSP49366 369 aaPredicted RBP14.28□□□□□ -0.12
RPAIN-209ENST00000571558 SEMA3BQ13214 749 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 BYSLQ13895 437 aaKnown RBP14.28□□□□□ -0.12
RPAIN-209ENST00000571558 HSF5Q4G112 596 aaPredicted RBP14.28□□□□□ -0.12
RPAIN-209ENST00000571558 TRIM61Q5EBN2 209 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 SLC23A3Q6PIS1 610 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 BEND5Q7L4P6 421 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 SLFN11Q7Z7L1 901 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 PIP4P1Q86T03 277 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 KIAA1958Q8N8K9 716 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 USP33Q8TEY7 942 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 FNIP1Q8TF40 1166 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 BTBD6Q96KE9 485 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 NMUR1Q9HB89 426 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 ANAPC7Q9UJX3 599 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 FREM2Q5SZK8 3169 aa14.28□□□□□ -0.12
RPAIN-209ENST00000571558 ZNF500O60304 480 aaPredicted RBP14.27□□□□□ -0.12
RPAIN-209ENST00000571558 DAB1O75553 588 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 GRAP2O75791 330 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 LTFP02788 710 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 ZDHHC11BP0C7U3 371 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 TCF3P15923 654 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 MSNP26038 577 aaKnown RBP14.27□□□□□ -0.12
RPAIN-209ENST00000571558 IFNAR2P48551 515 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 MRPS21P82921 87 aaKnown RBP14.27□□□□□ -0.12
RPAIN-209ENST00000571558 CRY1Q16526 586 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 IFI16Q16666 785 aaKnown RBP14.27□□□□□ -0.12
RPAIN-209ENST00000571558 EML3Q32P44 896 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 BSPRYQ5W0U4 402 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 ANO7Q6IWH7 933 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 C11orf63Q6NUN7 778 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 DCUN1D2Q6PH85 259 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 PROSER1Q86XN7 944 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 NIPA2Q8N8Q9 360 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 RXFP2Q8WXD0 754 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 PIGKQ92643 395 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 NT5C3BQ969T7 300 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 SPACA7Q96KW9 195 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 POPDC2Q9HBU9 364 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 OSER1Q9NX31 292 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 EHD2Q9NZN4 543 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 GMIPQ9P107 970 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 MMP17Q9ULZ9 603 aa14.27□□□□□ -0.12
RPAIN-209ENST00000571558 NUP205Q92621 2012 aa14.27□□□□□ -0.13
RPAIN-209ENST00000571558 SETXQ7Z333 2677 aaKnown RBP14.27□□□□□ -0.13
RPAIN-209ENST00000571558 FANCGO15287 622 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 KIF5CO60282 957 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 PALMO75781 387 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 PROSCO94903 275 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 P2RY2P41231 377 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 MATKP42679 507 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 PTPN9P43378 593 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 ZNF143P52747 638 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-209ENST00000571558 RNASE9P60153 205 aaKnown RBP14.26□□□□□ -0.13
RPAIN-209ENST00000571558 YWHAGP61981 247 aaKnown RBP eCLIP14.26□□□□□ -0.13
RPAIN-209ENST00000571558 SIM1P81133 766 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-209ENST00000571558 IFRD2Q12894 506 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-209ENST00000571558 TAF10Q12962 218 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 ZNF77Q15935 545 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 ZNF423Q2M1K9 1284 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 CCDC14Q49A88 953 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 OTUD1Q5VV17 481 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-209ENST00000571558 SNX30Q5VWJ9 437 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 BNIPLQ7Z465 357 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 CPNE8Q86YQ8 564 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 CEP76Q8TAP6 659 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 RIN3Q8TB24 985 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 OVCA2Q8WZ82 227 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 FBXO32Q969P5 355 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 CNPY3Q9BT09 278 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 TPSD1Q9BZJ3 242 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 GOLPH3Q9H4A6 298 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 LCMT1Q9UIC8 334 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 KLK13Q9UKR3 277 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 INVSQ9Y283 1065 aa14.26□□□□□ -0.13
RPAIN-209ENST00000571558 TRAV19A0A0A6YYK7 116 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 A0A1W2PQH9 124 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 MYO1FO00160 1098 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 MAP3K13O43283 966 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 TADA3O75528 432 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 NFATC1O95644 943 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 CAPNS1P04632 268 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 PDGFRAP16234 1089 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 ENGP17813 658 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 PFKLP17858 780 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 TFE3P19532 575 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-209ENST00000571558 BCKDHBP21953 392 aa14.25□□□□□ -0.13
RPAIN-209ENST00000571558 MAN1A1P33908 653 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms