RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 LACTB2Q53H82 288 aaPredicted RBP15.68■□□□□ 0.1
CIITA-204ENST00000570546 OR52K1Q8NGK4 314 aa15.68■□□□□ 0.1
CIITA-204ENST00000570546 ZMAT2Q96NC0 199 aaKnown RBP15.68■□□□□ 0.1
CIITA-204ENST00000570546 VAT1Q99536 393 aa15.68■□□□□ 0.1
CIITA-204ENST00000570546 RMND5AQ9H871 391 aa15.68■□□□□ 0.1
CIITA-204ENST00000570546 PIGNO95427 931 aa15.68■□□□□ 0.1
CIITA-204ENST00000570546 HLA-DPA1P20036 260 aa15.68■□□□□ 0.1
CIITA-204ENST00000570546 ATP4AP20648 1035 aa15.68■□□□□ 0.1
CIITA-204ENST00000570546 ZNF572Q7Z3I7 529 aaPredicted RBP15.68■□□□□ 0.1
CIITA-204ENST00000570546 PSTKQ8IV42 348 aaKnown RBP15.68■□□□□ 0.1
CIITA-204ENST00000570546 COLEC11Q9BWP8 271 aa15.68■□□□□ 0.1
CIITA-204ENST00000570546 CDHR5Q9HBB8 845 aa15.68■□□□□ 0.1
CIITA-204ENST00000570546 VTA1Q9NP79 307 aa15.68■□□□□ 0.1
CIITA-204ENST00000570546 TMEM191CA6NGB0 347 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 SPATA31C2B4DYI2 1134 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 C2CD2LO14523 706 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 ATP6V1B2P21281 511 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 FASP25445 335 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 XRCC4Q13426 336 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 TTC27Q6P3X3 843 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 PALB2Q86YC2 1186 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 MPP4Q96JB8 637 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 ZFRQ96KR1 1074 aaKnown RBP15.67■□□□□ 0.1
CIITA-204ENST00000570546 A0A087X1B8 175 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 SNUPNO95149 360 aaKnown RBP15.67■□□□□ 0.1
CIITA-204ENST00000570546 LGALS2P05162 132 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 TUBP50607 506 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 CRY2Q49AN0 593 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 ZC3H12AQ5D1E8 599 aaKnown RBP15.67■□□□□ 0.1
CIITA-204ENST00000570546 UNC93AQ86WB7 457 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 TMCO5AQ8N6Q1 288 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 PIDD1Q9HB75 910 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 SPON1Q9HCB6 807 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 LRRC4CQ9HCJ2 640 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 RGS18Q9NS28 235 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 PHGDHO43175 533 aaKnown RBP15.67■□□□□ 0.1
CIITA-204ENST00000570546 CTXN3Q4LDR2 81 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 ARCQ7LC44 396 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 MICU2Q8IYU8 434 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 HELQQ8TDG4 1101 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 CDT1Q9H211 546 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 LRMDAQ9H2I8 198 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 COPS7BQ9H9Q2 264 aaPredicted RBP15.67■□□□□ 0.1
CIITA-204ENST00000570546 PAIP2BQ9ULR5 123 aaKnown RBP15.67■□□□□ 0.1
CIITA-204ENST00000570546 LMO7Q8WWI1 1683 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 ABCG1P45844 678 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 CCDC85BQ15834 202 aaPredicted RBP15.67■□□□□ 0.1
CIITA-204ENST00000570546 PTF1AQ7RTS3 328 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 KIAA2013Q8IYS2 634 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 ZSCAN18Q8TBC5 510 aaPredicted RBP15.67■□□□□ 0.1
CIITA-204ENST00000570546 FAM192AQ9GZU8 254 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 TKTL2Q9H0I9 626 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 PIF1Q9H611 641 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.67■□□□□ 0.1
CIITA-204ENST00000570546 MORF4L1Q9UBU8 362 aa15.67■□□□□ 0.1
CIITA-204ENST00000570546 FAM95CA0A1B0GW59 222 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 TCRBV9S1A1TA0A576 114 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 SERPIND1P05546 499 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 USP17L7P0C7H9 530 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 SWT1Q5T5J6 900 aaKnown RBP15.66■□□□□ 0.1
CIITA-204ENST00000570546 LPCAT2Q7L5N7 544 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 TFAP2DQ7Z6R9 452 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 TTC30BQ8N4P2 665 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 LZTR1Q8N653 840 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 ZNF670Q9BS34 389 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 MID1IP1Q9NPA3 183 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 ADAM28Q9UKQ2 775 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 ATP11BQ9Y2G3 1177 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 H7C4K7 107 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 CXCL11O14625 94 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 ASS1P00966 412 aaKnown RBP15.66■□□□□ 0.1
CIITA-204ENST00000570546 DNAJB2P25686 324 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 NOS2P35228 1153 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 SOAT1P35610 550 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 RENBPP51606 427 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 PKNOX1P55347 436 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 UBAP2LQ14157 1087 aaKnown RBP15.66■□□□□ 0.1
CIITA-204ENST00000570546 RIOX2Q8IUF8 465 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 WNT8BQ93098 351 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 CLPBQ9H078 707 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 SLC17A7Q9P2U7 560 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 AVILO75366 819 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 WFS1O76024 890 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 CELF2O95319 508 aaKnown RBP15.66■□□□□ 0.1
CIITA-204ENST00000570546 ST8SIA6P61647 398 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 DGKZQ13574 1117 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 CYP51A1Q16850 503 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 LRRC8DQ7L1W4 858 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 ALYREFQ86V81 257 aaKnown RBP15.66■□□□□ 0.1
CIITA-204ENST00000570546 BHMTQ93088 406 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 OTULINQ96BN8 352 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 CERS2Q96G23 380 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 RMND5BQ96G75 393 aaPredicted RBP15.66■□□□□ 0.1
CIITA-204ENST00000570546 ULBP1Q9BZM6 244 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 ATXN3LQ9H3M9 355 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 NDUFAF1Q9Y375 327 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 CCDC15Q0P6D6 951 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 BHLHE22Q8NFJ8 381 aaPredicted RBP15.66■□□□□ 0.1
CIITA-204ENST00000570546 LRRN4Q8WUT4 740 aa15.66■□□□□ 0.1
CIITA-204ENST00000570546 MBOAT7Q96N66 472 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms