RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 WFDC5Q8TCV5 224 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 GANCQ8TET4 914 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 SNX19Q92543 992 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 TTC17Q96AE7 1141 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 PRICKLE1Q96MT3 831 aaPredicted RBP17.21■□□□□ 0.35
CDR2-207ENST00000569045 BTBD1Q9H0C5 482 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 PDCL3Q9H2J4 239 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 ACP6Q9NPH0 428 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 PRSS16Q9NQE7 514 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 DNAAF2Q9NVR5 837 aaKnown RBP17.21■□□□□ 0.35
CDR2-207ENST00000569045 ASNSD1Q9NWL6 643 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 SCML1Q9UN30 329 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 PCDHGC3Q9UN70 934 aa17.21■□□□□ 0.35
CDR2-207ENST00000569045 MAP1BP46821 2468 aaKnown RBP17.2■□□□□ 0.34
CDR2-207ENST00000569045 BECN2A8MW95 431 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 ERCC5P28715 1186 aaPredicted RBP17.2■□□□□ 0.34
CDR2-207ENST00000569045 CCR1P32246 355 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 NNMTP40261 264 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 CSKP41240 450 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 OXCT1P55809 520 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 SIM1P81133 766 aaPredicted RBP17.2■□□□□ 0.34
CDR2-207ENST00000569045 TTC39BQ5VTQ0 682 aaPredicted RBP17.2■□□□□ 0.34
CDR2-207ENST00000569045 RAP1GAP2Q684P5 730 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 IL27RAQ6UWB1 636 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 C11orf57Q6ZUT1 292 aaPredicted RBP17.2■□□□□ 0.34
CDR2-207ENST00000569045 PIP4P1Q86T03 277 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 IRF2BP1Q8IU81 584 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 PASD1Q8IV76 773 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 KDM1BQ8NB78 822 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 PPP1R9BQ96SB3 815 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 NUP62CLQ9H1M0 184 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 NDST4Q9H3R1 872 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 SGK2Q9HBY8 427 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 DDIT4Q9NX09 232 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 CYTH4Q9UIA0 394 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 DNAJC12Q9UKB3 198 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 PCDHB9Q9Y5E1 797 aa17.2■□□□□ 0.34
CDR2-207ENST00000569045 ADAMTS9Q9P2N4 1935 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 CACNA1EQ15878 2313 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 SYNJ2BP-COX16A0A087WUM0 186 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 KCNU1A8MYU2 1149 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 SEMA4FO95754 770 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 CER1O95813 267 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 SRPRAP08240 638 aaKnown RBP17.19■□□□□ 0.34
CDR2-207ENST00000569045 TACR2P21452 398 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 RPS14P62263 151 aaKnown RBP17.19■□□□□ 0.34
CDR2-207ENST00000569045 GRIK2Q13002 908 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 SLC12A1Q13621 1099 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 TEAD4Q15561 434 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 HNRNPA1L2Q32P51 320 aaKnown RBP17.19■□□□□ 0.34
CDR2-207ENST00000569045 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 PITRM1Q5JRX3 1037 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 OR6B2Q6IFH4 312 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 TUBGCP2Q9BSJ2 902 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 COX16Q9P0S2 106 aa17.19■□□□□ 0.34
CDR2-207ENST00000569045 EIF2B4Q9UI10 523 aaKnown RBP17.19■□□□□ 0.34
CDR2-207ENST00000569045 TARSL2A2RTX5 802 aaKnown RBP17.18■□□□□ 0.34
CDR2-207ENST00000569045 TRIM16O95361 564 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 IGLV3-25P01717 112 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 AFF3P51826 1226 aaKnown RBP17.18■□□□□ 0.34
CDR2-207ENST00000569045 ECT2LQ008S8 904 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 APBA1Q02410 837 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 TAF5Q15542 800 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 ZDHHC17Q8IUH5 632 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 DEFB106AQ8N104 65 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 OR2I1PQ8NGU4 316 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 LMLNQ96KR4 655 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 SLC2A13Q96QE2 648 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 CPXM1Q96SM3 734 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 RSPH9Q9H1X1 276 aaPredicted RBP17.18■□□□□ 0.34
CDR2-207ENST00000569045 ERVW-1Q9UQF0 538 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 PCDH15Q96QU1 1955 aa17.18■□□□□ 0.34
CDR2-207ENST00000569045 EDDM13A0A1B0GTR0 161 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 SPAARA0A1B0GVQ0 90 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 FOXN3O00409 490 aaPredicted RBP17.17■□□□□ 0.34
CDR2-207ENST00000569045 C7P10643 843 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 ACSL1P33121 698 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 ANP32AP39687 249 aaKnown RBP17.17■□□□□ 0.34
CDR2-207ENST00000569045 MATKP42679 507 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 SULT2A1Q06520 285 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 RAPGEF1Q13905 1077 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 ARID5BQ14865 1188 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 DPCR1Q3MIW9 517 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 FSCBQ5H9T9 825 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 CT47A1Q5JQC4 288 aaPredicted RBP17.17■□□□□ 0.34
CDR2-207ENST00000569045 USP30Q70CQ3 517 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 SND1Q7KZF4 910 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDR2-207ENST00000569045 WDTC1Q8N5D0 677 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 TMEM35BQ8NCS4 154 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 MSANTD4Q8NCY6 345 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 C1orf131Q8NDD1 294 aaKnown RBP17.17■□□□□ 0.34
CDR2-207ENST00000569045 TMEM51Q9NW97 253 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 RRN3Q9NYV6 651 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 XPO7Q9UIA9 1087 aaKnown RBP17.17■□□□□ 0.34
CDR2-207ENST00000569045 PAXBP1Q9Y5B6 917 aa17.17■□□□□ 0.34
CDR2-207ENST00000569045 KMT2BQ9UMN6 2715 aaPredicted RBP17.16■□□□□ 0.34
CDR2-207ENST00000569045 MUC22E2RYF6 1773 aaPredicted RBP17.16■□□□□ 0.34
CDR2-207ENST00000569045 A0A1B0GVM2 712 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 TCAF2A6NFQ2 919 aa17.16■□□□□ 0.34
CDR2-207ENST00000569045 PCNX2A6NKB5 2137 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms