RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 KIAA1524Q8TCG1 905 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 CD101Q93033 1021 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 KCTD15Q96SI1 283 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-224ENST00000568877 PNKPQ96T60 521 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 EPAS1Q99814 870 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 P2RY13Q9BPV8 354 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 SLC2A11Q9BYW1 496 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 DNAJC17Q9NVM6 304 aaKnown RBP17.27■□□□□ 0.36
COMMD4-224ENST00000568877 DEC1Q9P2X7 70 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 FBXO10Q9UK96 956 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 CLEC4EQ9ULY5 219 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 COL4A3Q01955 1670 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 A0A1B0GVM2 712 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 TCAF2A6NFQ2 919 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 ZSCAN12O43309 604 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 CREB3O43889 395 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 PALMO75781 387 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 CNTN5O94779 1100 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 LUC7L3O95232 432 aaKnown RBP17.26■□□□□ 0.35
COMMD4-224ENST00000568877 CD72P21854 359 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 GJC1P36383 396 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 DGKGP49619 791 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 CDH4P55283 916 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 PON2Q15165 354 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 DPYSL2Q16555 572 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 ATP13A4Q4VNC1 1196 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 ALFQ53S48 1182 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 LRRC38Q5VT99 294 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 RWDD4Q6NW29 188 aaKnown RBP17.26■□□□□ 0.35
COMMD4-224ENST00000568877 CHST9Q7L1S5 443 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 POLNQ7Z5Q5 900 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 CCDC117Q8IWD4 279 aaPredicted RBP17.26■□□□□ 0.35
COMMD4-224ENST00000568877 RHOT1Q8IXI2 618 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 CCAR2Q8N163 923 aaKnown RBP17.26■□□□□ 0.35
COMMD4-224ENST00000568877 CARNMT1Q8N4J0 409 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 LRRC57Q8N9N7 239 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 TBC1D31Q96DN5 1066 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 ZYG11BQ9C0D3 744 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.26■□□□□ 0.35
COMMD4-224ENST00000568877 MPP6Q9NZW5 540 aa17.26■□□□□ 0.35
COMMD4-224ENST00000568877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-224ENST00000568877 H0Y626 953 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 CLDN11O75508 207 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 CISD3P0C7P0 127 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 HOXC13P31276 330 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 HTR7P34969 479 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 ZNF135P52742 658 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-224ENST00000568877 ZNF177Q13360 481 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-224ENST00000568877 PREPLQ4J6C6 727 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-224ENST00000568877 PPP6R3Q5H9R7 873 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-224ENST00000568877 GRAMD4Q6IC98 578 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 MFN1Q8IWA4 741 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 SUGP1Q8IWZ8 645 aaKnown RBP17.25■□□□□ 0.35
COMMD4-224ENST00000568877 SYCE1Q8N0S2 351 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 PHTF2Q8N3S3 785 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 ZNF557Q8N988 423 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-224ENST00000568877 FIBINQ8TAL6 211 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 RETREG1Q9H6L5 497 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 FBRSL1Q9HCM7 1045 aaKnown RBP17.25■□□□□ 0.35
COMMD4-224ENST00000568877 ARHGEF4Q9NR80 690 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 PYCARDQ9ULZ3 195 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 NEU3Q9UQ49 428 aa17.25■□□□□ 0.35
COMMD4-224ENST00000568877 MRPS17Q9Y2R5 130 aaKnown RBP17.25■□□□□ 0.35
COMMD4-224ENST00000568877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
COMMD4-224ENST00000568877 KANSL1LA0AUZ9 987 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 EEF2KO00418 725 aaKnown RBP17.24■□□□□ 0.35
COMMD4-224ENST00000568877 TRIM24O15164 1050 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 KAT7O95251 611 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 TNNT1P13805 278 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 RHOQP17081 205 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 EPHB2P29323 1055 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 TPI1P60174 286 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 KDSRQ06136 332 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 GRSF1Q12849 480 aaKnown RBP eCLIP17.24■□□□□ 0.35
COMMD4-224ENST00000568877 CDH18Q13634 790 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 KRT81Q14533 505 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 TMEM196Q5HYL7 178 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 ZFYVE27Q5T4F4 411 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 ASTLQ6HA08 431 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-224ENST00000568877 REXO1L1PQ8IX06 675 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 KCTD6Q8NC69 237 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 FAM71BQ8TC56 605 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 WFDC5Q8TCV5 224 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 TBC1D17Q9HA65 648 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 PCDH18Q9HCL0 1135 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 CWC15Q9P013 229 aaKnown RBP17.24■□□□□ 0.35
COMMD4-224ENST00000568877 SLC27A6Q9Y2P4 619 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 CAPN6Q9Y6Q1 641 aa17.24■□□□□ 0.35
COMMD4-224ENST00000568877 A0A0A0MRY4 1105 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 TMEM221A6NGB7 291 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 H3BRJ5 948 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 M0R296 226 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 STK25O00506 426 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 PSTPIP1O43586 416 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 APODP05090 189 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 GOT1P17174 413 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 DRD1P21728 446 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 HLA-FP30511 346 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 ARL4AP40617 200 aa17.23■□□□□ 0.35
COMMD4-224ENST00000568877 GRIA2P42262 883 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms