RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 HHIPQ96QV1 700 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 GABRG3Q99928 467 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 FAM126AQ9BYI3 521 aaPredicted RBP10.13□□□□□ -0.79
CLK3-220ENST00000567992 TRIM7Q9C029 511 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 IRF2BPLQ9H1B7 796 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 WDCPQ9H6R7 721 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 ABHD10Q9NUJ1 306 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 ABCB8Q9NUT2 735 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 ZSCAN32Q9NX65 697 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 STIM2Q9P246 746 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 THAP10Q9P2Z0 257 aaPredicted RBP10.13□□□□□ -0.79
CLK3-220ENST00000567992 ZNF212Q9UDV6 495 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 GGA2Q9UJY4 613 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 INTS6Q9UL03 887 aaKnown RBP10.13□□□□□ -0.79
CLK3-220ENST00000567992 VANGL2Q9ULK5 521 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 NEU3Q9UQ49 428 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 PCDHGA2Q9Y5H1 932 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 R4GN57 208 aa10.13□□□□□ -0.79
CLK3-220ENST00000567992 GPR179Q6PRD1 2367 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 CHD5Q8TDI0 1954 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 IGLV3-10A0A075B6K4 115 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 A0A1W2PQF6 199 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 TMEM191CA6NGB0 347 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 PABPC1P11940 636 aaKnown RBP10.12□□□□□ -0.79
CLK3-220ENST00000567992 EIF4A3P38919 411 aaKnown RBP10.12□□□□□ -0.79
CLK3-220ENST00000567992 IL12RB1P42701 662 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 PXNP49023 591 aaPredicted RBP10.12□□□□□ -0.79
CLK3-220ENST00000567992 FNTBP49356 437 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 ZNF75DP51815 510 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 ADKP55263 362 aaKnown RBP10.12□□□□□ -0.79
CLK3-220ENST00000567992 MTA1Q13330 715 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 EIF4HQ15056 248 aaKnown RBP10.12□□□□□ -0.79
CLK3-220ENST00000567992 CRY1Q16526 586 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 PTPRNQ16849 979 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 ALFQ53S48 1182 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 MANEALQ5VSG8 457 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 TTC39BQ5VTQ0 682 aaPredicted RBP10.12□□□□□ -0.79
CLK3-220ENST00000567992 CXorf57Q6NSI4 855 aaKnown RBP10.12□□□□□ -0.79
CLK3-220ENST00000567992 SND1Q7KZF4 910 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLK3-220ENST00000567992 RASSF3Q86WH2 238 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 AHI1Q8N157 1196 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 CCAR2Q8N163 923 aaKnown RBP10.12□□□□□ -0.79
CLK3-220ENST00000567992 CARNMT1Q8N4J0 409 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 CAMKK1Q8N5S9 505 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 ARFGAP1Q8N6T3 406 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 OR8K1Q8NGG5 319 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 OR52K2Q8NGK3 314 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 WFIKKN2Q8TEU8 576 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 NTAN1Q96AB6 310 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 ZNF653Q96CK0 615 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 MRFAP1L1Q96HT8 127 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 C1orf74Q96LT6 269 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 MAGEB5Q9BZ81 275 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 TRIM5Q9C035 493 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 PARVAQ9NVD7 372 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 TMEM51Q9NW97 253 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 ELOVL2Q9NXB9 296 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 CACNA2D2Q9NY47 1150 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 CNOT8Q9UFF9 292 aaKnown RBP10.12□□□□□ -0.79
CLK3-220ENST00000567992 SLC12A6Q9UHW9 1150 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 SLC8A2Q9UPR5 921 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 OTOGLQ3ZCN5 2332 aa10.12□□□□□ -0.79
CLK3-220ENST00000567992 A0A1B0GVM2 712 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 SSU72P8A0A1W2PR75 194 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 TYW5A2RUC4 315 aaKnown RBP10.11□□□□□ -0.79
CLK3-220ENST00000567992 TCAF2A6NFQ2 919 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 DRGXA6NNA5 263 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 WASH3PC4AMC7 463 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 CNTN5O94779 1100 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 APBB3O95704 486 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 MYBL1P10243 752 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 HOXB2P14652 356 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 PRKCHP24723 683 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 NTSR1P30989 418 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 ADRA1BP35368 520 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 WASP42768 502 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 NRG1Q02297 640 aaPredicted RBP10.11□□□□□ -0.79
CLK3-220ENST00000567992 GFPT1Q06210 699 aaPredicted RBP10.11□□□□□ -0.79
CLK3-220ENST00000567992 SCAPQ12770 1279 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 CDH18Q13634 790 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 PITRM1Q5JRX3 1037 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 EOGTQ5NDL2 527 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 RABGAP1LQ5R372 815 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 MBLAC2Q68D91 279 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 HEATR6Q6AI08 1181 aaKnown RBP10.11□□□□□ -0.79
CLK3-220ENST00000567992 KIAA1211LQ6NV74 962 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 DCUN1D2Q6PH85 259 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 NUDT18Q6ZVK8 323 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 CHST9Q7L1S5 443 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 TRMT11Q7Z4G4 463 aaKnown RBP10.11□□□□□ -0.79
CLK3-220ENST00000567992 VPS36Q86VN1 386 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 WDR5BQ86VZ2 330 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 LONP2Q86WA8 852 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 ZNF557Q8N988 423 aaPredicted RBP10.11□□□□□ -0.79
CLK3-220ENST00000567992 TC2NQ8N9U0 490 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 MDGA1Q8NFP4 955 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 TSTD1Q8NFU3 115 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 FNIP1Q8TF40 1166 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 CYB5D2Q8WUJ1 264 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 TTC17Q96AE7 1141 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms